Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0180 ATGGACGACAGAGACTTCCGTCGTCGTAATCCGATGGCACATGCTTCTCCTCCTAATTACTTTGTTCGCCTGGAGAATACAACTTCCAAAGACGATTTATATTTGAGGAAGAGGACTGGGACCGGCATGCGTCGTTGGCTTTGTTGTTCTTGTAACATTGAAGAGCCTTACCCTTATGAAAACGAGCACCTTAAAAGCCCAAGGAACTATGGAGATGGTAATCCAAAAGGCCCAAAGGCTTCAGCTCCTCTTAAACCTGAAACACAAAAGGTTGCACCACCTATTGAAGTGTCAGCATTAGCTTTAGATGAACTAAAAGAAATGACTGACAACTTTGGGTCAAAGGCATTGATCGGTGAAGGATCTTATGGGAGGGTATATTATGCAACTATAAACAATGGAAAGGCCGTGGCTGTGAAGAAGCTTGATGTTTCATCAGAACCTGAATCCAATGTTGAGTTTTTGACCCAGGTTTCGATGGTCTCAAGAATGAAGCATGAAAATTTTGTTGAGCTGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTTGCATATGAGTTTGCAACTATGGGCTCTCTTCATGACATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAACCAGGGCCAACCCTTGACTGGATGCAACGAGTTCGAATTGCAGTTGATGCAGCAAGGGGGTTGGAATATCTACATGAGAAAGTTCAGCCAGCTATCATACACAGAGATATCCGATCAAGCAACGTACTAATTTTTGACGATGACAAAGCAAAGATAGCTGATTTTAATCTTTCAAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGTCAGTTGACTCTAAAGAGTGATGTCTACAGTTTTGGCGTTGTTCTTCTTGAGCTCCTTACAGGGAGAAAACCTGTTGACCATACCATGCCTCGAGGACAGCAAAGTCTGGTTACATGGGCTACTCCAAGACTGAGTGAAGATAAAGTCAAACAATGCGTTGATCCAAAACTGAAGGGAGAATATCCTCCTAAAGGAGTTGCCAAGCTGGCAGCTGTTGCAGCACTTTGTGTGCAGTACGAAGCCGAGTTTAGGCCGAATATGAGCATCGTGGTCAAGGCGCTGCAACCACTTCTGAAGGCTCCTCCTCCTCCTGCTCAAGCACCGGAAATTTGA 1221 0.4472 MDDRDFRRRNPMAHASPPNYFVRLENTTSKDDLYLRKRTGTGMRRWLCCSCNIEEPYPYENEHLKSPRNYGDGNPKGPKASAPLKPETQKVAPPIEVSALALDELKEMTDNFGSKALIGEGSYGRVYYATINNGKAVAVKKLDVSSEPESNVEFLTQVSMVSRMKHENFVELHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPAIIHRDIRSSNVLIFDDDKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTLKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPPPPAQAPEI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0180 406 MobiDBLite consensus disorder prediction 64 89 - -
Lele21g0180 406 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 46 398 - -
Lele21g0180 406 FunFam PTI1-like tyrosine-protein kinase 3 76 188 - -
Lele21g0180 406 Gene3D Transferase(Phosphotransferase) domain 1 190 397 - -
Lele21g0180 406 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Lele21g0180 406 ProSitePatterns Tyrosine protein kinases specific active-site signature. 240 252 IPR008266 GO:0004672|GO:0006468
Lele21g0180 406 Gene3D Phosphorylase Kinase; domain 1 85 188 - -
Lele21g0180 406 SUPERFAMILY Protein kinase-like (PK-like) 93 390 IPR011009 -
Lele21g0180 406 FunFam PTI1-like tyrosine-protein kinase 3 190 399 - -
Lele21g0180 406 SMART tyrkin_6 112 390 IPR020635 GO:0004713|GO:0006468
Lele21g0180 406 Pfam Protein tyrosine and serine/threonine kinase 117 390 IPR001245 GO:0004672|GO:0006468
Lele21g0180 406 ProSiteProfiles Protein kinase domain profile. 112 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0180 Lele-ChrLele21 1177488 1180775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0180 47 391 Receptor kinase-like Gene Family AT4G02010 44.828 2.09e-91 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lele21g0180 PK_Tyr_Ser-Thr 5.6e-47 CL0016