Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0171 ATGACCATCATGACGTTGGGGGTGGGGGGTTTACTTTTCTTTGGAACATTCTACGAACTGGTAATCCCACAGGACGTCATCCGTGTTTCACATGTCCAAGAAGACTTGAGCTTGACTTGCCGCATTCACTTCCCAAACTTTGTGAGGAAAATTGATTCTTGCTCTGGAACCAGTAATTACGTGGGCGATTCTTTCACTGCAGGAGATGGCAATACCCCATGGGTGGTTTCACCTTCTGGGGATTTTGCCTTTGGGTTTCAACAACATAAAAATAATAGTTTCTTCTTGCTCTCCATCTGGTATGCCAACATTCCCAACAAAACCATCGTTTGGTATGCGAATGGAGGCAGTCCTGCTCCAAAGGGGTCAATAGTTCAGATTACTGCAGCAGAAGGGCTTAAGCTTACTTATCCTGATGGTCGGATTCTTTGGACACCAGAAAATAGGCCTGCTGGTACTGTTGCTTCTGGTGCCTTGAATGACTCCGGCAACTTTTTTCTTCAGGATAGCAGATCTAACTCTGTCTGGGAGACCTTCAAGAATCCTAAAGACACCATGTTGCCCTCACAAATTTTGGAGAAAGGAGGAAAGCTTTCTTCTCGGAAGCCAGAGGCTGATTTCTCGCAGGGAAGGTTTCAACTTGTTCTTCAGGATGATGGTAATCTTGAGATGCATACTGTAAACTTACCATCTGAGTATGCTAATGAAAATTATTTCGAAAGTAATACTGGTTCCGATACATCAAGTTCTGGAATTCAACTGGTCTTCAACGAATCTTCGGGAGACTTTTATGTAAAAAGGAACAACAGTGATAGATACACCTTCTCAACCCTGAGCATAGGCTCTCCGACTCAATATTATCTTCGAGCTACTCTTAATTTTGATGGAGTTTTCACTTTCTATCAACATCCTAAGAGTTCCTCTGGAACTTGGACACCTATCTGGTCCAAGCCAGATAATATCTGTCGTGCTAAGATCAGCGAAGGAACAGGTATTTGCGGATATAATAGCATTTGTAGATTGGGTGATAATAGTAGACCAAATTGTACATGCCCACCAGGTTATTCCTTACTAGATCTTGATGACCCAAATGGTAGTTGTAAACCGGATTTCGTACAGGGCTGTAAAGAAGATGAGCTTAGTCAAGGGAAAGATCTATATGACTTTGAGGTGTTGACAGATATAGATTGGCCTCTCTCTGATTATGCGCTTCTTAAGCCTTTTACTGAAGATGAGTGCCGAAGGGCCTGCACGGAAGATTGCTTTTGTGCCGTTGCCATTTTCAGAGCAGGTGACAGTTGCTGGAAGAAGAGGTGGCCACTTTCAAATGGCATGTATGACACGAGTTTAAATGGTGGTAAGGCCTTAATCAAGGTGAGGAAGGACAATTCCTCCCTAATTGGTCCTCCTGGTCCTTCAATCATCGAAAGAAAGAATCAGGACACTTTGATTTTGGCGGGCTCTGTCCTCTTGGGTAGCTCTGCCTTTCTTAATCTCCTATTAATTGGAGCACTCTGTCTAGGCTTTTCCTACATTTACCAATTCAAGAAGAAGCTTAAGAAAGTTTACCGAAGTGACATTGCTGTTGAAACCAATTTGCGTTGTTTTACTTATAAGGAGCTTGACGAGGCTACAAATGGATTCAAGGAAGAGTTAGGAAGAGGAGCTTTTGCTGTTGTTTATAAAGGAACCATAAACACGGGCTCTTCTGTACCTGTGGCGGTCAAAAGGTTGAACAACTTCCTTTTTCAAGAAACTGTGAAGGAATTCAAGAATGAAGTCAATGTCATTGGCCAGACCCATCACAAGAATCTGAGCCGAACCCATACAGCTATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAGAACTTGCCCATCACGGCCAAAGTAGATGTCTACAGTTTTGGTGTATTGCTGCTGGAGATTGTCTGTTGTAGAAGAAGTGTGGACATGGAACCGGAGAATGAGGAGAGGGCAATCTTAACAGATTGGGCTTATGACTGCTACACAACAGGTTCTCTGGAAGCTTTGGTTGAAGAAGATGAGGAGGCACTGAATGACAAGAAGAACCTGGAGAAGTTAGTAATGATTGCCATATGGTGTACTCAAGAGGAGCCAACTCTGAGACCCACAATGAGAAAGGTTTCTCAGATGCTTGAGGGAGTTTCTGAAGTGCCTGCTCCACCATGCCAGATCCTAAATAGTGTGACTCGAGATCACTGTATCTCACTCGCTTTGGATGATTGA 2256 0.4335 MTIMTLGVGGLLFFGTFYELVIPQDVIRVSHVQEDLSLTCRIHFPNFVRKIDSCSGTSNYVGDSFTAGDGNTPWVVSPSGDFAFGFQQHKNNSFFLLSIWYANIPNKTIVWYANGGSPAPKGSIVQITAAEGLKLTYPDGRILWTPENRPAGTVASGALNDSGNFFLQDSRSNSVWETFKNPKDTMLPSQILEKGGKLSSRKPEADFSQGRFQLVLQDDGNLEMHTVNLPSEYANENYFESNTGSDTSSSGIQLVFNESSGDFYVKRNNSDRYTFSTLSIGSPTQYYLRATLNFDGVFTFYQHPKSSSGTWTPIWSKPDNICRAKISEGTGICGYNSICRLGDNSRPNCTCPPGYSLLDLDDPNGSCKPDFVQGCKEDELSQGKDLYDFEVLTDIDWPLSDYALLKPFTEDECRRACTEDCFCAVAIFRAGDSCWKKRWPLSNGMYDTSLNGGKALIKVRKDNSSLIGPPGPSIIERKNQDTLILAGSVLLGSSAFLNLLLIGALCLGFSYIYQFKKKLKKVYRSDIAVETNLRCFTYKELDEATNGFKEELGRGAFAVVYKGTINTGSSVPVAVKRLNNFLFQETVKEFKNEVNVIGQTHHKNLSRTHTAIRGTKGYVALEWFKNLPITAKVDVYSFGVLLLEIVCCRRSVDMEPENEERAILTDWAYDCYTTGSLEALVEEDEEALNDKKNLEKLVMIAIWCTQEEPTLRPTMRKVSQMLEGVSEVPAPPCQILNSVTRDHCISLALDD 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0171 751 FunFam Serine/threonine-protein kinase 183 325 - -
Lele21g0171 751 Gene3D Transferase(Phosphotransferase) domain 1 609 743 - -
Lele21g0171 751 SMART blect_4 64 182 IPR001480 -
Lele21g0171 751 ProSiteProfiles Protein kinase domain profile. 546 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele21g0171 751 ProSitePatterns Protein kinases ATP-binding region signature. 552 576 IPR017441 GO:0005524
Lele21g0171 751 ProSiteProfiles Bulb-type lectin domain profile. 58 180 IPR001480 -
Lele21g0171 751 PIRSF SRK 34 609 IPR024171 GO:0004674
Lele21g0171 751 PIRSF SRK 606 746 IPR024171 GO:0004674
Lele21g0171 751 Pfam Protein tyrosine and serine/threonine kinase 618 722 IPR001245 GO:0004672|GO:0006468
Lele21g0171 751 Pfam Protein tyrosine and serine/threonine kinase 548 612 IPR001245 GO:0004672|GO:0006468
Lele21g0171 751 SUPERFAMILY Protein kinase-like (PK-like) 533 736 IPR011009 -
Lele21g0171 751 Gene3D Phosphorylase Kinase; domain 1 511 608 - -
Lele21g0171 751 Gene3D - 182 314 IPR036426 -
Lele21g0171 751 FunFam Serine/threonine-protein kinase 56 181 - -
Lele21g0171 751 CDD B_lectin 68 182 IPR001480 -
Lele21g0171 751 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 225 IPR036426 -
Lele21g0171 751 Pfam D-mannose binding lectin 108 192 IPR001480 -
Lele21g0171 751 Gene3D - 62 181 IPR036426 -
Lele21g0171 751 Coils Coil 677 697 - -
Lele21g0171 751 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 65 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0171 Lele-ChrLele21 1124008 1126630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0171 580 724 Receptor kinase-like Gene Family AT1G60800 31.724 4.42e-21 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele21g0171 PK_Tyr_Ser-Thr 8.5e-08 CL0016