Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0159 ATGGATTACAAGTTTCCCAAGATAGAAATCTCCAGGCAAAAGGAATTTTCAACTTGCTTTAAAGAAACGGCAATGGGATCAAAGATTTGGGGCGATCCAATCATTAGAAGCTCTCAGACTCCCACTGCTTCTCATCACATTCATTTAGCAATGGGGATGGATTCAATTTCATCAGAAAAGCTTCTTTCAATTTCAGATTCTAAGTCAACAATAGAAGAGCTAAGAGGAGCCACTTTCACTAGTTTTCTCCCTCGAAAGTTCAGTGATCAAGAGGAAATCACCCAAGTGCAACAGGAAAATCAATCCCTTTGTGAATTCAATCCCATCTGTACTCCAAATGCTTCAACCTCAGGAACCAGAGGAAGTTTCATTCCTCTAAATCTGTTGGAAACACTTCCAGCATTACCAAGAGCAGATGCATCTGATGAGTCAGCTTCTTCAACTGCTACACCTAGATTTCCATATTTGACATTGTTTCTGCAGGATCCCTTCATGTTATTTTCATCATCCTCAAAGGTCACAGAGTCGCTAGGCAAGCCCGAGAATTGTGAATCTCAGCCAACAATTTCAGACACTTCATTTTCTGTGTCCCGGTGTCATGCAATTCAGAGCCAGGCAGTTACCGATCCACTCAAAATGAATCAGCATCTTAAAAACGTCCGATCCAAGTCTTTTAGTGACTACTGCTTGAGCACCACCAAGACTCAGCCCATGAAGTTTGCTGGACGGGTAAAGCTGTTTAAGGGGGTGAGGCAAAGACACTGGGGAAAATGGGTTGCAGAGATCAGACTACCAAGGAATAGAACGAGGGTTTGGCTGGGGACATTTGACACAGCTGAAGATGCAGCCATGGCCTATGACACAGCAGCATACATACTTCGTGGAGAATATGCTCAATTGAACTTTCCAGATCTAAAGCATCATATTAAGGCCAATTCTTTGAATGGAACAACAGCTGCGCTACTGGAGGCAAAGCTTCAAGCAATATCACAAGGAATTTCTTCTCCCAGAGTGCCCACTGATTCCCTGCCAGGATCATTGGATAAGAACCCAGTCGAGAACGCCAAAATCAATGGTAAAACTCAGAATCCAGCTAAAGGAGAATGGCAGCTTGAGATAGAGAACAGGATTGGAGCTGATACAATAGAGAGAAGAAAAAACAATCATCAAGAAGTATCGGACATGGAAGCTATTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATTCCCTTTTAGTCTCCGATTCATGA 1263 0.4283 MDYKFPKIEISRQKEFSTCFKETAMGSKIWGDPIIRSSQTPTASHHIHLAMGMDSISSEKLLSISDSKSTIEELRGATFTSFLPRKFSDQEEITQVQQENQSLCEFNPICTPNASTSGTRGSFIPLNLLETLPALPRADASDESASSTATPRFPYLTLFLQDPFMLFSSSSKVTESLGKPENCESQPTISDTSFSVSRCHAIQSQAVTDPLKMNQHLKNVRSKSFSDYCLSTTKTQPMKFAGRVKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAMAYDTAAYILRGEYAQLNFPDLKHHIKANSLNGTTAALLEAKLQAISQGISSPRVPTDSLPGSLDKNPVENAKINGKTQNPAKGEWQLEIENRIGADTIERRKNNHQEVSDMEAIQLSRMPSLDMDIIWDSLLVSDS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0159 420 Gene3D AP2/ERF domain 246 304 IPR036955 GO:0003700|GO:0006355
Lele21g0159 420 PRINTS Ethylene responsive element binding protein signature 247 258 IPR001471 GO:0003700|GO:0006355
Lele21g0159 420 PRINTS Ethylene responsive element binding protein signature 269 285 IPR001471 GO:0003700|GO:0006355
Lele21g0159 420 ProSiteProfiles AP2/ERF domain profile. 246 303 IPR001471 GO:0003700|GO:0006355
Lele21g0159 420 MobiDBLite consensus disorder prediction 335 362 - -
Lele21g0159 420 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 105 415 - -
Lele21g0159 420 SUPERFAMILY DNA-binding domain 246 304 IPR016177 GO:0003677
Lele21g0159 420 FunFam Ethylene-responsive transcription factor 2 245 304 - -
Lele21g0159 420 Pfam AP2 domain 247 295 IPR001471 GO:0003700|GO:0006355
Lele21g0159 420 SMART rav1_2 246 309 IPR001471 GO:0003700|GO:0006355
Lele21g0159 420 CDD AP2 245 305 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0159 Lele-ChrLele21 1024190 1025452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0159 124 415 AP2-EREBP Transcription Factor Family AT4G13620 43.000 5.54e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele21g0159 AP2 4.2e-13 CL0081