Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0158 ATGGGTTCTTCGTACTGTTGCATCCTCGGGACTGATGAGGGAATTCATAGCTTTGACAGTTATGCTGAACCATTCCCTCTATTTTCTTTCTCTCGGTCTCTATTTTATCTCCCAGCTTCTCCCTGGGAGTTATTTCGTCAACCCTGGTGGTTGTGGATCCCATCTCATCAACCTCGTGGTTTGTTTCTGTTCTCCGAGATAATCTTAATGTATAATGATTTTGATGGGCTTTTCAGCCCTGCTGTTTCCCACATTTTGGTTTCTTTCTTTTCTTGTATTACCCCCAATTATTTGGTTTTTCTCGATTTCCCTTCGGGAGCTTCGCAGTATCGACTTTATCCTGCTCCTCTTGCGAAATTTGAAGATATCGTGGCTGATCGCGGGCTCTTTATGCATACCTTGGAGAAGCTCCACAGTACTATGCTTACCAAGTTCATGATTCCCGTTTTCGGGGGAAGAGTACTAGATTTGCATCGGCTTTTCTTGGAAGTGACTTTTCGTGGAGGCATTAAGAAGATTATAAGGGAGACAAGATGGAAAGAAATAGCTGCTGTTTTCCACTTTCCATCTACAGCCACGAATGCTTCTTTTGTGTTGCGGAGGCACTATTCTCAATTGCTTTACCACTATGAACAAATATACTATTTTAAGGCCCCAGGATGGCATGACACTTATGATGCTGCGCAGAGTCCATCAACAGTGCCAGTTCCTGCTCCAAGAACGCAGCAATTTTTGCCTCCCACTGTTAATGCCTCTGAATTGCCTGAAGGGACGTCAGCTTCTTCTGCAGGAACTCCAGTGATTGGGGTGATTGATGGAAAATTCGAAACTGGGTATCTTGTTACTATCACAGTGGGTTCAGAGACACTTAGAGGTGTACTATATCTGGCTCCACCAAACCCTGCCTTGCCGACAATGCTGCAACATAGTAGTGTTCCAGTCAGTAACAAGCATAATATGGACATGGATGCATCTCATGGAATGATAGTAGTGGGTGTTGAATCTAGCTATCTGGGTGCGGAGAAACAATCAAAGGAGAAAGAAGGGAATGATGATGGACATCATCAACAAGCTCAAAAGATGGATGAGAGCTCAAGCATGATGGCCATGTAG 1113 0.4412 MGSSYCCILGTDEGIHSFDSYAEPFPLFSFSRSLFYLPASPWELFRQPWWLWIPSHQPRGLFLFSEIILMYNDFDGLFSPAVSHILVSFFSCITPNYLVFLDFPSGASQYRLYPAPLAKFEDIVADRGLFMHTLEKLHSTMLTKFMIPVFGGRVLDLHRLFLEVTFRGGIKKIIRETRWKEIAAVFHFPSTATNASFVLRRHYSQLLYHYEQIYYFKAPGWHDTYDAAQSPSTVPVPAPRTQQFLPPTVNASELPEGTSASSAGTPVIGVIDGKFETGYLVTITVGSETLRGVLYLAPPNPALPTMLQHSSVPVSNKHNMDMDASHGMIVVGVESSYLGAEKQSKEKEGNDDGHHQQAQKMDESSSMMAM 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0158 370 SMART bright_3 125 216 IPR001606 GO:0003677
Lele21g0158 370 MobiDBLite consensus disorder prediction 341 370 - -
Lele21g0158 370 MobiDBLite consensus disorder prediction 341 359 - -
Lele21g0158 370 ProSiteProfiles ARID domain profile. 124 215 IPR001606 GO:0003677
Lele21g0158 370 CDD ARID_HMGB9-like 126 211 IPR045303 GO:0003677
Lele21g0158 370 Pfam ARID/BRIGHT DNA binding domain 129 211 IPR001606 GO:0003677
Lele21g0158 370 SMART ARID_2 121 211 - -
Lele21g0158 370 Gene3D - 116 223 IPR036431 GO:0003677
Lele21g0158 370 SUPERFAMILY ARID-like 124 225 IPR036431 GO:0003677
Lele21g0158 370 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 107 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0158 Lele-ChrLele21 1018081 1020991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0158 116 300 ARID Transcription Factor Family AT1G04880 55.102 2.74e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Lele21g0158 ARID 1.2e-15 CL0123