Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0143 ATGTCATTAGAATCACCGAGATTGGTTGTGAAGAAGGTTTTAGCCAAATCTCTGCAGCAATCCGATGGAGCTCTTGTCAGAGGCTTTATTGGAAGGTGCCATACAACAACATTCATTAATCTTCTCCTTCATGTTAATTCTCCTTCACACTTGTCTCATTTTTTCCTCTTGGTTTTTCTCTCTGTGACCCTGAAAAGAGAGTTGGAATGCTTGGATCCATTTGTGATGTTGATTCACTTCTCAGTGACTGCACCTGGAGGATTTCCTGATCATCCCCACAGAGGTTTCGAGGCTGTCACCTACATGCTGCAGGGAGCCATAAACTATGAAGATTTTGGTGGACACAAGGCTACTTTAAGAACAGGCGACATTCAGTGGGTGAGAGCAGGAAGAGGAATAGTTCACTCAGAAGTGCCAGCTGAAGAAGGAACCCATACCGGACTCCAACTCTGGATCAATTTATCTTCCAAACATAAAATGATTGAACCTCGGTGCCAAGAGGTTGTGAGCAAGGAGATACCGAGCGTAGAGATAGATGGAGCAGAAATTAGGGTTTTGGCTGGAGAAGCATTAGGGGTTAAAGCTCCGGTATGCAGCAAGACTCCGATCATGTTGCTGGACGTCACTGTTAAGCCCGATTCACGAGTGCATTTGAGAACCCCAGAATCATGGTGGAACTACTTGGTCTACGTCATCGAAGGAGAGGCCGTGGTGGGGTGTGAGTCATCAGCGGCGATCACGGAAGAGCAGGTGGTGGTGCTGGGCGGAGGAGATGGAGTAAGCGTGTGGAACAAGTCGTCGGAGAAGGTGTTGAGGATGGTGGTGGCAGGAGGAGAGCCGTTGAAGGAGAAAGTGGCGCAGAGGGGACCATTTGTGATGAACACAGAGTCAGAGATAGAGGAAGCCGTGGAGGATTTTCGTCTCTGTAAAAATGGCTTCGAGATGGCAAAGTCTTGGAAATCTAATGCCTAG 972 0.4784 MSLESPRLVVKKVLAKSLQQSDGALVRGFIGRCHTTTFINLLLHVNSPSHLSHFFLLVFLSVTLKRELECLDPFVMLIHFSVTAPGGFPDHPHRGFEAVTYMLQGAINYEDFGGHKATLRTGDIQWVRAGRGIVHSEVPAEEGTHTGLQLWINLSSKHKMIEPRCQEVVSKEIPSVEIDGAEIRVLAGEALGVKAPVCSKTPIMLLDVTVKPDSRVHLRTPESWWNYLVYVIEGEAVVGCESSAAITEEQVVVLGGGDGVSVWNKSSEKVLRMVVAGGEPLKEKVAQRGPFVMNTESEIEEAVEDFRLCKNGFEMAKSWKSNA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0143 323 PANTHER PIRIN-RELATED 66 322 IPR012093 -
Lele21g0143 323 CDD cupin_pirin_N 66 154 - -
Lele21g0143 323 Pfam Pirin 66 152 IPR003829 -
Lele21g0143 323 SUPERFAMILY RmlC-like cupins 60 321 IPR011051 -
Lele21g0143 323 CDD cupin_pirin_C 202 280 - -
Lele21g0143 323 Gene3D Jelly Rolls 174 281 IPR014710 -
Lele21g0143 323 Gene3D Jelly Rolls 65 307 IPR014710 -
Lele21g0143 323 Pfam Pirin C-terminal cupin domain 206 311 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0143 Lele-ChrLele21 903483 905098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0143 6 317 Calmodulin-binding Proteins AT3G59220 48.562 4.78e-102 299