Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0141 ATGAGAGCCATCAGGCACAGCTTTTCACTGCACAATTGGCGACCTTCTTCTTCTTCTTCTTCGCCCGCCTCTGCACTTTCATCTCTCCCAACTATTATCATGTCACAATCAGATCAATCTTCAGTTCTCGAAACGCCCAGATTGGTTCTCAAGAAGGTCTTGGCCAAATCTCAACATGAAGGCGACGGTGCTGTTGTCAGAAGAGCCCTTGGAAGGAGCGAGTTGAAGAGTTTGGATCCCTTTCTGATGATGGATCACTTCTCAGGCTTTGAAACTGTCACATACATGCTGCAGGGAGACATAACTCATCAAGATTTTGCTGGGCATAAGGGTACAATAAGAACAGGTGAAGTTCAGTGGATGACCGCAGGCAGAGGAATAATTCACTCTGAGATGCCTGGAGGAGAAGGAACCCACAAGGGATTGCAGCTATGGATCAATTTATCTTCCAAAGATAAGATGATTGAACCAAATTATCAAGAACTTCCAAAAGAGGACATACCAGAAGCAGAACAAGATGGGGTTGAAGTGAGGGTTATAGCAGGAGAAGCAATGGGAGTTCATTCCCCTGTTTACACTAGAACCCCAACCATGTTCCTTGATTTCACTATCAGCCCAGGAGCTGAATGGCATCAGAACATTCCAGAATCATGGAACGCCTTTGTTTATGTGATTGAAGGAGAAGGGATTTTTGGGTCTGCAAGTTCTTCACCAGTGGCGGCTCACCATGTGCTGGTCTTGACCAATGGAGATGGTCTAAGTTTCTGGAACAGATCTTCAAAGCCTCTGAGGTTTGTGTTGATTGCAGGGCAGCCACTGGATGAACCAGTGGTTCAATATGGACCCTTCGTGATGAACACACAGTCTGAGATTGAAAAGACCATAGAGGACTATCAATATTGCAAGAATGGGTTCGAGATGGGGAGTTATTGGAGATCTCAACAGTAA 948 0.4536 MRAIRHSFSLHNWRPSSSSSSPASALSSLPTIIMSQSDQSSVLETPRLVLKKVLAKSQHEGDGAVVRRALGRSELKSLDPFLMMDHFSGFETVTYMLQGDITHQDFAGHKGTIRTGEVQWMTAGRGIIHSEMPGGEGTHKGLQLWINLSSKDKMIEPNYQELPKEDIPEAEQDGVEVRVIAGEAMGVHSPVYTRTPTMFLDFTISPGAEWHQNIPESWNAFVYVIEGEGIFGSASSSPVAAHHVLVLTNGDGLSFWNRSSKPLRFVLIAGQPLDEPVVQYGPFVMNTQSEIEKTIEDYQYCKNGFEMGSYWRSQQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0141 315 PANTHER PIRIN-RELATED 34 314 IPR012093 -
Lele21g0141 315 MobiDBLite consensus disorder prediction 10 25 - -
Lele21g0141 315 SUPERFAMILY RmlC-like cupins 47 312 IPR011051 -
Lele21g0141 315 CDD cupin_pirin_C 196 272 - -
Lele21g0141 315 Pfam Pirin C-terminal cupin domain 199 304 IPR008778 -
Lele21g0141 315 Pfam Pirin 87 146 IPR003829 -
Lele21g0141 315 Gene3D Jelly Rolls 60 299 IPR014710 -
Lele21g0141 315 MobiDBLite consensus disorder prediction 1 25 - -
Lele21g0141 315 PIRSF Pirin 45 312 IPR012093 -
Lele21g0141 315 Gene3D Jelly Rolls 168 273 IPR014710 -
Lele21g0141 315 CDD cupin_pirin_N 64 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0141 Lele-ChrLele21 894886 896563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0141 45 308 Calmodulin-binding Proteins AT3G59220 60.573 1.96e-120 346