Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0139 ATGGTGAACCTCATGGACTGGCAGAAGCAGCAGCGCCAGCAGCAGAGTGGGAATGCCAACAGTGGAAACGGAGGAATGATGTACGTGAAGGTCATGACGGACGACCAATTGGAGACTCTCAGGGAGCAAATCGCTCTCTATACCTCCATTTGCGAGCAGCTCGTTGAGATGCACAAGACTCTCACCGCTCAGCAGGATCTTGCCGGAGTTAGGCTGGGAAATATATACTGTGACCCATTGATGACTTCTGCTGGACACAAGATAACTTCCAGACAGAGGTGGACTCCAACGCCTGTGCAACTTCAAATTCTTGAGCGTATATTTGATCAGGGGAACGGAACTCCAAGCAAGCAAAAGATCAAGGAGATTACTGCTGAACTGAGCCAGCATGGCCAGATTTCTGAAACAAATGTCTATAATTGGTTCCAGAATAGGCGTGCGCGATCAAAAAGAAAGCAGCAAAATGTGGCACCTAATAACGGTGAATCTGAAGTAGAGACTGAAGCTGAATCTTCCAAAGATAAGAAAACAAAACCCGAGGAATTTCAGTCCCAACATAGTGCATCAACTAGGGCTGAAGATTTGTGCTTCCAGAATCATGAAGTGTGCTCTGACTTGCACTACTTGAATCCAGAGTCCTGTAAACCAGAATCCATGTTTCCATCAGATGGCAGTCTGAAAAATACAAGAAGTTTCGGCCAAATGTCTATTTTTGATGGAATGCTATCAAACTCGAGGGATGGCTATATCACTGGAAAAATGCAAGTGCCAGGAAGCTACAATTTATACCAGCAACCTGGAGACTACAGCATGACGGAATGGCGTATAGGTTTGACATCATATTGTGAAGTTGGTTTTCTCGTTACCAACCATGGAGATCCTGATGATGTGCTGCTTGAGATATTCTCATGGTTATCTGCAAAATCTTTTTACAAGTTCAAATGTGTCGACACATATGGTGCAAGAACTGAGTTGCATCACCTATCCTCAGAGAACCGAACCTCTGGTGTTTCTCATGAATTCTTACATTTTTTGGAGCACTACCCAGCTTGCAGAGTTGTGGCATCAAGTAATGGCCTGATTCTTGGTCGCAGTAATACAGAGTTGTTCATTTTTAAAACAGTGACAGAATCATGGCTTCCCATTCCCACCCCAGAATATCTGGAAGAATACCCAGATACTGATCTTAACATTGCATTAGAGTGCAATATTGAAGACTCTAATGATTTCATGTTATTTCTACTTGTGGTCCAAGATGAGTGGATTTCTCAATACACACAACTTGATGTTCTATTCTATAAAGGAAGAAAAGCCCTCCACTTCAGATCAGATTCCTCTGCTTTTCTGAGCGAGAAGAGCCCTTATTTCAGGCCTTATATAATGGCTTACAATATTGAAGATGGAAGCTCAAGAATGCTTAGGGTCCCTATAGAAGCTAGAGTTGACTCTCAGGACTTGACATGCCAAATGGGCATTTATAAATGGGGGAAATCAACAACTTCAGACGAGTCAATCTGTTTGAGTGAAAGAATTGGCTCTCATGACTTGACATGCCAAATGGGCATTTATAAATGGGGGAAATCAACAACTTCAGATGAGTCAATTTGTTTGGTGAGATTAAGGAAAAATGTTTTTACCATATGGGTTTTAACTGATTATGAGACTAGCAAATGGAGAAGGATTTTGAAGATAAGGGTGAAAGCAATGGGTATGAAAGAAGAAGATCCTGTTATGGTAACAGGATTTACTCTTATGAATGGAGATCAGTTGACCTTTTCGACGACGAAGGAGATTTATAGATACGGATTGAGACAAGAAAACTATATGAAGCTCAAGGAAATTTGTGAACATGGGTTTGGATGTGATGCAACAAACTGTACTACTTATTCATACACACTTCGTTCTTGTGGAGACGATGCTACAACATAG 1929 0.4173 MVNLMDWQKQQRQQQSGNANSGNGGMMYVKVMTDDQLETLREQIALYTSICEQLVEMHKTLTAQQDLAGVRLGNIYCDPLMTSAGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPNNGESEVETEAESSKDKKTKPEEFQSQHSASTRAEDLCFQNHEVCSDLHYLNPESCKPESMFPSDGSLKNTRSFGQMSIFDGMLSNSRDGYITGKMQVPGSYNLYQQPGDYSMTEWRIGLTSYCEVGFLVTNHGDPDDVLLEIFSWLSAKSFYKFKCVDTYGARTELHHLSSENRTSGVSHEFLHFLEHYPACRVVASSNGLILGRSNTELFIFKTVTESWLPIPTPEYLEEYPDTDLNIALECNIEDSNDFMLFLLVVQDEWISQYTQLDVLFYKGRKALHFRSDSSAFLSEKSPYFRPYIMAYNIEDGSSRMLRVPIEARVDSQDLTCQMGIYKWGKSTTSDESICLSERIGSHDLTCQMGIYKWGKSTTSDESICLVRLRKNVFTIWVLTDYETSKWRRILKIRVKAMGMKEEDPVMVTGFTLMNGDQLTFSTTKEIYRYGLRQENYMKLKEICEHGFGCDATNCTTYSYTLRSCGDDATT 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0139 642 SUPERFAMILY Homeodomain-like 89 154 IPR009057 -
Lele21g0139 642 MobiDBLite consensus disorder prediction 149 189 - -
Lele21g0139 642 MobiDBLite consensus disorder prediction 166 182 - -
Lele21g0139 642 Gene3D - 93 157 - -
Lele21g0139 642 MobiDBLite consensus disorder prediction 1 23 - -
Lele21g0139 642 ProSiteProfiles 'Homeobox' domain profile. 87 152 IPR001356 GO:0003677
Lele21g0139 642 SMART HOX_1 89 156 IPR001356 GO:0003677
Lele21g0139 642 MobiDBLite consensus disorder prediction 1 25 - -
Lele21g0139 642 Pfam Homeodomain 91 151 IPR001356 GO:0003677
Lele21g0139 642 CDD homeodomain 91 153 IPR001356 GO:0003677
Lele21g0139 642 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 269 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0139 Lele-ChrLele21 878904 883607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0139 27 272 Wox Gene Family AT4G35550 53.585 1.67e-84 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele21g0139 Homeodomain 4.9e-18 CL0123