Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0138 ATGTACCCTTCTCCCTCATCGTCCTCCTCACAGTCTCAAAGCGGCTTAACCCGCTACGGTTCCGCCCCGGGCTCTCTCCTCACCAACGCCGTCGATGCTGTTATTGGAGGAGCTGACCGCGAATTCTCCACCACTGCGGTTGGATCACGCCCTCCAGTGACCCATTTCTTCCCTGGCGAATCCTCCGAGTCCTCCTGCAAGGTCAACTCATCCTCCGATCCAAAAGACAATCCTCCCAGGCTCGGATTGCAGAGATCCTACGGTCTCCATGACGGAGCCACCATCGGCTTTGGCATCTCCTCTTCGGCTCTTCTTCGTCAGAGAAGCTCGCCAGCTGGCTTCCTCAGCCATCTCCCTGCCACTCCACCTCCTGATAATGGAGGTTTCTCAATTTCAAGGGGCAGTGGAAGCTATAGCGCACAAGGCGCCTCCAATAGTGGCCATGGAATATCAAGGCTAAAATCTCAATTGAGCTTCACAGGGCAAGAATCTCTTTCTCAGATATCGGAGGTGAACGAACATGTTGATGGAATCAATTCTGACAATGGCCACCATAGAGTTACAAATTCTTATGCCACAACCAGCTTTGGAATTGACACCTGGGATGGTTCAAACTCCATTGTGTTTTCTGCTCCCTCTAGTAAACGTGCTAAAAATATAGATGGTGACATTCTGAACTGTCTTAATGCCTTGGACTCTCAGTTTAGTCTGCCACAAACAACTCTGGAAATGGCAACAGTGGAGAAGCTACTTCAGATTCCTGAAGATTCTGTCCCCTGTAAAATTCGTGCTAAGCGAGGCTGTGCTACTCATCCAAGAAGCATTGCAGAACGGGAGAGAAGAACTAGAATTAGTGGGAAGCTGAAGAAGTTGCAAGAACTGGTGCCTAATATGGACAAGCAAACAAGCTATGCGGACATGCTGGATTTGGCTGTTCAACATATCAAAGGTCTACAAACTCAAGTTCAGAACTCGAGAATTGCAGCTGTGGATGTAAACAAAGCTCATAGTATTTGTTTTGACAAGAGGCTGTGGTTCATGGGTCCTGATGCCAAAGGATCAACAACTGATTTTGTACCTTACCAAATACCAACTTCAATTTTAATAATAATGCAGTCAGTAGCTTTTACAGAAATTCAGTGCGTGGAACTGTACATAATAGCTGAGTTTGAGATGAGCAAATATTTGGTGTACAAATGCTTTCATTTGGAATGTTTGTCGAGAAAGTAG 1230 0.4659 MYPSPSSSSSQSQSGLTRYGSAPGSLLTNAVDAVIGGADREFSTTAVGSRPPVTHFFPGESSESSCKVNSSSDPKDNPPRLGLQRSYGLHDGATIGFGISSSALLRQRSSPAGFLSHLPATPPPDNGGFSISRGSGSYSAQGASNSGHGISRLKSQLSFTGQESLSQISEVNEHVDGINSDNGHHRVTNSYATTSFGIDTWDGSNSIVFSAPSSKRAKNIDGDILNCLNALDSQFSLPQTTLEMATVEKLLQIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVQHIKGLQTQVQNSRIAAVDVNKAHSICFDKRLWFMGPDAKGSTTDFVPYQIPTSILIIMQSVAFTEIQCVELYIIAEFEMSKYLVYKCFHLECLSRK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0138 409 MobiDBLite consensus disorder prediction 43 87 - -
Lele21g0138 409 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 325 - -
Lele21g0138 409 MobiDBLite consensus disorder prediction 1 23 - -
Lele21g0138 409 CDD bHLH_AtbHLH_like 273 326 IPR045239 -
Lele21g0138 409 MobiDBLite consensus disorder prediction 58 77 - -
Lele21g0138 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 271 326 IPR036638 GO:0046983
Lele21g0138 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 268 318 IPR011598 GO:0046983
Lele21g0138 409 Pfam Helix-loop-helix DNA-binding domain 273 319 IPR011598 GO:0046983
Lele21g0138 409 Gene3D - 265 328 IPR036638 GO:0046983
Lele21g0138 409 SMART finulus 274 324 IPR011598 GO:0046983
Lele21g0138 409 MobiDBLite consensus disorder prediction 128 149 - -
Lele21g0138 409 MobiDBLite consensus disorder prediction 115 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0138 Lele-ChrLele21 873244 878433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0138 15 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 51.156 7.72e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele21g0138 HLH 6e-09 No_clan