Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0131 ATGACACAGGCTTTAAACACTGCTTTGCTGCTGAAAGAGAAGGAAGTGGTGCCAGTTACGGCAAACCGGTTAGAGGCTGCCGATTCAGTGGTGGACGTTAGAGGCTCAGACTGCTTGGTCGGTCTAGAATGCTTTCTGAACATTGTCAGGGCACTGGGAATGGGATCATGCCTCTCTGACACCCATCCCCTCCCTTATTCGCCGGAATCCTCTTCAGACAGTGCGAAGCGAAGGAGGAGATTGAGGAGCAGCTCTTCGCTTGATTCTAAAACGGAATTGGGCCTACATAAAATCCCTGGGAGATTGTTCGTAAATGGATCCAGTGAGGTTGCATCCCTGTTTTGCAAGCAAGGGAAAAAAGGGATCAACCAGGATGCCATGCTTGTTTGGGAGAACTTCTGTTCAAAGGACGCCATTTTTTGTGGAGTTTTCGATGGTCATGGTCCTAGTGGTCATAGGGTAGCAAGAAGAGTCAGGGATTCTTTCCCTTTAAAGCTTATTGCCCAATGGGAATTGCATCATAACAATAAGGATGGACTAAGTGATATCAGAAATGCTATGGCAAACCATAAGTCAGAGGAGATTGGATGTAGAATGGTTGATGAGAAATCTAGTCTTACTGATCATGAGCACGACTGCACCAATACTTTGAAGGTGCTGAAGGAATCTTTTCTGAAGGCTTGCAAGTTTATGGACAAGGAACTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGGACAACGGCAGTCACCTTGGTCAAACAGGGCAAGGATCTTGTTATTGGAAATGTTGGGGATTCAAGAGCTATATTGGGCACTAGGGATCATGATAATTCTCTTATTGCTGTTCAGTTGACCATTGACCTGAAGCCAAATCTTCCAAGGGAAGAAGAGAGAATCAAGCGTTGCAGAGGAAGAGTATTTGCTCTTCGTAATGAACCTGAGGTTGCTCGAGTTTGGTTGCCCAATGCTGACTCCCCAGGCCTTGCTATGGCACGAGCTTTTGGAGATTTCATTCTTAAAGACTTTGGTCTGATATCTGTTCCCGATTTATCCCATCACCGCCTTACTGAGAAGGATGAATTTGTAGTATTAGCCACAGATGGGATTTGGGATGTTTTGTCCAACCAAGAAGTTGTAGACATTGTGGCATCTGTGTCACGCTCTTCCGCAGCTCGAACACTTGTTGAGACTGCCGTTCGAGCATGGAGGACAAAGTACCCCACTTCCAAAGTTGATGATTGTGCTGTAGTGTGTCTCTTTTTTGATTCAGATTCAGACTTGAAGTCAGCTTATTCCACCGACAAGGATGTGCCCGAGGCATCAGTTAACCACCGATGTGAGGGATCTGCTCCTGAAACTGGAGTTAACTGTTCAGAAAAATCTATTGCTTTCCCTGAGAATTTTCCTATGCTTGGGAAGAAAGGAGATGGAGTAGAAGCTGTACAGCAGTAG 1458 0.4547 MTQALNTALLLKEKEVVPVTANRLEAADSVVDVRGSDCLVGLECFLNIVRALGMGSCLSDTHPLPYSPESSSDSAKRRRRLRSSSSLDSKTELGLHKIPGRLFVNGSSEVASLFCKQGKKGINQDAMLVWENFCSKDAIFCGVFDGHGPSGHRVARRVRDSFPLKLIAQWELHHNNKDGLSDIRNAMANHKSEEIGCRMVDEKSSLTDHEHDCTNTLKVLKESFLKACKFMDKELKLHPDIDCFCSGTTAVTLVKQGKDLVIGNVGDSRAILGTRDHDNSLIAVQLTIDLKPNLPREEERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDLSHHRLTEKDEFVVLATDGIWDVLSNQEVVDIVASVSRSSAARTLVETAVRAWRTKYPTSKVDDCAVVCLFFDSDSDLKSAYSTDKDVPEASVNHRCEGSAPETGVNCSEKSIAFPENFPMLGKKGDGVEAVQQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0131 485 PANTHER PROTEIN PHOSPHATASE 83 421 - -
Lele21g0131 485 MobiDBLite consensus disorder prediction 72 86 - -
Lele21g0131 485 Pfam Protein phosphatase 2C 158 407 IPR001932 -
Lele21g0131 485 Gene3D - 106 425 IPR036457 -
Lele21g0131 485 SMART PP2C_4 101 421 IPR001932 -
Lele21g0131 485 CDD PP2Cc 110 423 IPR001932 -
Lele21g0131 485 MobiDBLite consensus disorder prediction 63 88 - -
Lele21g0131 485 ProSiteProfiles PPM-type phosphatase domain profile. 110 423 IPR001932 -
Lele21g0131 485 SUPERFAMILY PP2C-like 110 424 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0131 Lele-ChrLele21 812574 815468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0131 80 427 PP2C-type Phosphatase Gene Family AT1G16220 60.784 7.02e-152 440