Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0121 ATGGCATTGTGCCTTCCTTCTTCGCTCTGCAATGACAGGCTTGTTACTTCCCTGGATTCCAACTTTCTTTCTGGTGAAATCCCGATCTCCTTTCCCATTAGCAGAAACCCAAGAAATAGTTACCGCCTAGGCAATGTTTCTGTTTCAGTTTCTTGTTCCTCTGTCAAACTTGTGCGGGACAGGTCACTGGACAGGCATGTTGTTAAAAAGAATAAAATTCGGTTTGTTCAAAAACTGATGACTTTACTTCTTTCTAAGCCAAAACACTATCTTCCACTTCACATTCTCACAAAATGCCGGTCATATCTAAATATTTATTCACCCCGTTCCCTACTTGCTATGATCCATCGCTATCCATCCATCTTTGAATTCTTCACCATCCCATATCCTCCAACGCCACTCAATGCTACAAAGCCATATCCTCAACTCTGTGTTCGTCTAACTCCAGCTGCCGCATCTCTTGCTGCTGAGGAATTGAATCTCAAAGATGCTGTTTCCATCACCTTGGCAATCAAACTCCAGAAACTTCTTATGTTATCTTCTCATCATCGGCTCGTTTTGTCAAAGTTGGTTCACCTAGCTCCGGATCTTGGCCTTCCTCCTAATTTTCGATCCAGGCTGTGCAATGACCACCCAGATAGATTCAAAACTGTTGACACTTCCTATGGTCGTGCACTTGAGCTTGTATCCTGGGACTCCAGCTTGGCTCAGTCTTTGCCCTCTCCTACATTCCACTCTAGTGATTTAATTGTTGACAGACCTTTGAAGTTTAAGCAATTGAGACTTCGAAAGGGGCTTAATTTAAAGAGACGCCACCAGGATTTTTTGATAAAATTTGAAGAAATGCCTGAAGTGTGTCCTTATGGGACCCCTATTGAAAGTCTGGAAAAAGAATCGGTGGAGTCAGAGAAGAGATCTTGTGCTGTAGTAAGAGAGATTCTTGGAATGATGGTTGAAAAGAGGACTTTGGTAGACCACTTGACCCATTTCAGGAAGGAGTTTGGGCTCCCAAACAAGTTGAGAGGGATGATCCTGAGGCACCCGGAGTTATTTTACGTTAGTTTAAAAGGGCAAAGGGATTCTGTGTTCCTGGTTGAGAAGTTTGATGAGAAGGGTGACCTGTTAGAGAAGGATAAGCTTTTGGTATTACAAGATCAATGGATGGCGTTGGCCAGGGAATCCAAAAGAATGAAATGGGAAAGAAGAAAGTCTAGGATTAACAAGGATGTTGGTCGTGTCAGTGCTAGTAATGATGCTGATAATGATGTTGATATGGAGGGGGAGGGGGAGGACGATGATTATGAGATTGATAACTTCAAAAATGGCTATGATGATGGTTTTGAGGATTTATTTGAGGATTTTGATTTTGAGGACGATGATGACATCGACGATGACAAAAGCAAGTTTTTTGGCCGAAATAAGAATGGGGAGTTTTGGACTGCTGGATCTTCTAGTCAAAGTGGTTTGGAAGGAGCACAAGTGCAACCTTGAATTTCTATGGAACAGGTTATCTTGAAGATAATTAAACATTGTAAGGACCATTCACCTACCTTAGTCACCGGACAACTTCTTGGGCTTGATGTTGGCAGTGTTCTTGAAGTTACTAACTGTTTCCCCTTTCCGATAAGGGAAGAGGATGAGGAAATTGAGGCTGATGGTGCCAATTACCAGCTCGAAATGATGAGATGCTTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTATCAATCTACATTGCTAGGTTCCTTTCAGACTGTGGAGCTAATTGAAACTTTCATGAATTACCAGGAGAACATAAGACGCTGTGTTTGCATAATATATGATCCATCAAGGTCTGATCAAGGTGTCCTAGCTCTGAAGGCCTTGAAGCTCTCTGACTCATTCATGGAACTCTATCGCAGCAACAATATTACAGGGGAGAAACTGAGGGAGAAAAACTTGTCATGGGTAGATATCTTCGAGGAGATACCTATCAAAGTTTCAAATTCAGCCCTTATCAGTGCCTTTATGACTGAACTGGAACCTGATACACCAGTAAGCCAGTGTGATTATGATCGTCTCCAATTGTCAACTAGTTCATTAATGGAGAGGAATATGGAATTTTTGATTGAATGCATGGACGATTTGTCAATAGAACAACAGAAGTTTCAATTTTATTACCGGAGCTTGTCACGCCAGCAGGCCCAGCAGCAAGCTTGGCTTCAGAAGAGAAGAAAACTCTATGGGGATTCAGAAGGCTCTGGCAGTAGAGTCACAACATTCCTTATTGGGGATAGCATGGGGTTATCTTTGAACATCTTGAAAGAACCTTGGGCGGAAAACATGGCACGTAAAGCTGCTGGAGAGGACCCATTGCCTGAGGAAGATGCAACAAATCCTATTTTCAAGCCAATCCCTGAGCCATCGCGGTTAGACAGCTTCCTCATAACAAATCAAATTGCAAACTACTGCAACCAAATTAATGGTGTATCAGGGCAGAGCTTCAACAGACTCTATTTGATGAAGGCTCTACGCGACGATTGA 2529 0.4247 MALCLPSSLCNDRLVTSLDSNFLSGEIPISFPISRNPRNSYRLGNVSVSVSCSSVKLVRDRSLDRHVVKKNKIRFVQKLMTLLLSKPKHYLPLHILTKCRSYLNIYSPRSLLAMIHRYPSIFEFFTIPYPPTPLNATKPYPQLCVRLTPAAASLAAEELNLKDAVSITLAIKLQKLLMLSSHHRLVLSKLVHLAPDLGLPPNFRSRLCNDHPDRFKTVDTSYGRALELVSWDSSLAQSLPSPTFHSSDLIVDRPLKFKQLRLRKGLNLKRRHQDFLIKFEEMPEVCPYGTPIESLEKESVESEKRSCAVVREILGMMVEKRTLVDHLTHFRKEFGLPNKLRGMILRHPELFYVSLKGQRDSVFLVEKFDEKGDLLEKDKLLVLQDQWMALARESKRMKWERRKSRINKDVGRVSASNDADNDVDMEGEGEDDDYEIDNFKNGYDDGFEDLFEDFDFEDDDDIDDDKSKFFGRNKNGEFWTAGSSSQSGLEGAQVQPXISMEQVILKIIKHCKDHSPTLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNITGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVSQCDYDRLQLSTSSLMERNMEFLIECMDDLSIEQQKFQFYYRSLSRQQAQQQAWLQKRRKLYGDSEGSGSRVTTFLIGDSMGLSLNILKEPWAENMARKAAGEDPLPEEDATNPIFKPIPEPSRLDSFLITNQIANYCNQINGVSGQSFNRLYLMKALRDD 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0121 842 Pfam C-terminal region of eIF3h 616 741 IPR045810 -
Lele21g0121 842 Pfam C-terminal region of eIF3h 774 840 IPR045810 -
Lele21g0121 842 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 502 598 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele21g0121 842 MobiDBLite consensus disorder prediction 410 431 - -
Lele21g0121 842 Pfam Plant organelle RNA recognition domain 58 396 IPR021099 GO:0003723
Lele21g0121 842 ProSiteProfiles MPN domain profile. 497 630 IPR037518 -
Lele21g0121 842 CDD MPN_eIF3h 502 791 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lele21g0121 842 FunFam Eukaryotic translation initiation factor 3 subunit H 484 685 - -
Lele21g0121 842 Gene3D Cytidine Deaminase, domain 2 486 685 - -
Lele21g0121 842 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 51 421 IPR045040 GO:0003723
Lele21g0121 842 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 493 842 IPR027524 GO:0003743|GO:0005737|GO:0005852
Lele21g0121 842 SMART pad1_6 497 629 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0121 Lele-ChrLele21 766411 774235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0121 560 842 Eukaryotic Initiation Factors Gene Family AT1G10840 73.498 1.21e-140 414