Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0075 ATGGCCATTGCCAGGGTGTATTGTTTGCTTGCTATTGTGGAAAGGGAGATGGCTCGTTTAGTGTATGGCATAGACCAAGATAATGATGGCGATGAGGATGACGGTCAAGTCACTCTTAATAGTAAGGAGGGCAAGCAGGAAACAAGATTGAGACGTTCACCAACGGAGATGCGTTGCCATGGCGTGACCGTTCCCGGAAGCGATTATCGCTTCTTCTCCCCAACACCCTTATCTGTCGCCGGCAACAACGCTTTCAATCACAAATCTCTCCATTTCCCCCCTCGAACCGGCGGTTTCGGCTCTCTCAGAGTTAAAGCCGCCGTCAACGACGGCTATGTGGCCGAGGCATCCAAGTTGAGCTTCTACGAGCTCCTGGGTATACCCGAATCTGGGTCCTTGCCCGAGATCAAGCAGGCTTACAAGCAGCTCGCGCGCAAGTACCACCCTGATGTGTCGCCGCCAGATCGGGTGGTGGAGTATACGAAGAGGTTCATTCAGGTGCAGGAGGCCTATGAGACCTTGTCTGATCCTAGAAGGAGGGCTATGTACGATAGAGACATGGCCAGAGGGATTCACTTCGCCTTCTCCGCTCGCCGGCGCTACTACGACGATGAGGTAATTGAACAAAAGAGTGAGTGGAAACCTCGTTGGCAAAGTCAGCTATCAGAGCTGAAGAGAAGAAGCAAGTTCAAGGACAACGGAGAAAATCTGTCGTGGGCAGCTCAAATGCGTCGTCGAAGAGCAGAATCGTGTGACGACTCATAA 765 0.5216 MAIARVYCLLAIVEREMARLVYGIDQDNDGDEDDGQVTLNSKEGKQETRLRRSPTEMRCHGVTVPGSDYRFFSPTPLSVAGNNAFNHKSLHFPPRTGGFGSLRVKAAVNDGYVAEASKLSFYELLGIPESGSLPEIKQAYKQLARKYHPDVSPPDRVVEYTKRFIQVQEAYETLSDPRRRAMYDRDMARGIHFAFSARRRYYDDEVIEQKSEWKPRWQSQLSELKRRSKFKDNGENLSWAAQMRRRRAESCDDS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0075 254 FunFam Chaperone protein dnaJ 20, chloroplastic 106 215 - -
Lele21g0075 254 Gene3D DnaJ domain 109 215 IPR036869 -
Lele21g0075 254 CDD DnaJ 121 176 IPR001623 -
Lele21g0075 254 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 116 250 - -
Lele21g0075 254 ProSitePatterns Nt-dnaJ domain signature. 164 183 IPR018253 -
Lele21g0075 254 MobiDBLite consensus disorder prediction 35 55 - -
Lele21g0075 254 Pfam DnaJ domain 121 184 IPR001623 -
Lele21g0075 254 SMART dnaj_3 119 179 IPR001623 -
Lele21g0075 254 MobiDBLite consensus disorder prediction 26 55 - -
Lele21g0075 254 PRINTS DnaJ domain signature 140 155 IPR001623 -
Lele21g0075 254 PRINTS DnaJ domain signature 159 179 IPR001623 -
Lele21g0075 254 PRINTS DnaJ domain signature 122 140 IPR001623 -
Lele21g0075 254 PRINTS DnaJ domain signature 179 198 IPR001623 -
Lele21g0075 254 ProSiteProfiles dnaJ domain profile. 120 187 IPR001623 -
Lele21g0075 254 SUPERFAMILY Chaperone J-domain 117 192 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0075 Lele-ChrLele21 496615 501611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0075 116 184 C2H2 Transcription Factor Family AT1G74250 40.278 4.35e-08 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g0075 21 496615 501611 Lele21g0075 21 496615 501611 ECH
Lele21g0075 21 496615 501611 Lele23g1979 23 22665444 22666914 hybridization
Lele21g0075 21 496615 501611 Lele24g0071 24 468383 474718 hybridization