Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0046 ATGTATTTCTATCAGAACCGGTACTCTAGTTTTGATCACGTGAGGGTCTTGTGTGACAAGGCAAAGGAGATTTTGATGATAGAGAGCAATGTTCAGCCTGTAAAAAGTCCTGTCACAATTTGCGGTGATATTCATGGGCAATTCCATGATCTTGCTGAGCTTTTTCGCATTGGAGGCAAGTGTCCAGATACAAATTACTTGTTTATGGGAGATTATGTTGATCGTGGCTATTATTCAGTTGAAACCGTAACACTTTTGGTTGCCCTCAAAGTGCGCTATCCTCAACGCATTACTATTCTGAGGGGAAATCATGAAAGTCGTCAGATTACTCAAGTTTATGGGTTTTACGATGAGTGCCTACGAAAGTATGGTAATGCCAACGTTTGGAAGATCTTTACAGATTTGTTTGACTACTTCCCCTTGACAGCATTGGTTGAATCTGAAATATTTTGTCTACATGGTGGGTTGTCCCCATCAATTGAAACCCTTGATAACATTCGTAATTTTGATCGTGTGCAAGAAGTTCCTCACGAAGGACCCATGTGTGATCTTCTGTGGTCTGACCCCGATGATCGCTGTGGTTGGGGTATCTCTCCTAGAGGTGCCGGATATACCTTTGGCCAGGACATATCTGAGCAGTTCAACCACACCAATAACTTAAAGCTTATTGCTAGAGCTCACCAGCTGGATCAAAAGGTGGTTACCATATTTAGTGCACCTAATTACTGTTACCGCTGTGGGAACATGGCATCCATCCTAGAAGTTGATGACTGCAAGGGACACACATTCATTCAGTTTGAACCGGCACCGAGGAGGGGAGAGCCAGATGTGACCAGGAGAACGCCTGATTACTTCCTATGA 861 0.4355 MYFYQNRYSSFDHVRVLCDKAKEILMIESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0046 286 SUPERFAMILY Metallo-dependent phosphatases 5 271 IPR029052 -
Lele21g0046 286 FunFam Serine/threonine-protein phosphatase 2 286 - -
Lele21g0046 286 PRINTS Serine/threonine phosphatase family signature 134 160 IPR006186 GO:0016787
Lele21g0046 286 PRINTS Serine/threonine phosphatase family signature 37 64 IPR006186 GO:0016787
Lele21g0046 286 PRINTS Serine/threonine phosphatase family signature 99 123 IPR006186 GO:0016787
Lele21g0046 286 PRINTS Serine/threonine phosphatase family signature 163 190 IPR006186 GO:0016787
Lele21g0046 286 PRINTS Serine/threonine phosphatase family signature 232 248 IPR006186 GO:0016787
Lele21g0046 286 PRINTS Serine/threonine phosphatase family signature 66 93 IPR006186 GO:0016787
Lele21g0046 286 CDD MPP_PP2A_PP4_PP6 14 270 - -
Lele21g0046 286 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 7 286 - -
Lele21g0046 286 SMART pp2a_7 9 270 IPR006186 GO:0016787
Lele21g0046 286 Gene3D - 1 286 IPR029052 -
Lele21g0046 286 Pfam Calcineurin-like phosphoesterase 37 228 IPR004843 GO:0016787
Lele21g0046 286 ProSitePatterns Serine/threonine specific protein phosphatases signature. 100 105 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0046 Lele-ChrLele21 327214 332688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0046 36 225 Calmodulin-binding Proteins AT5G63870 35.683 1.77e-32 119