Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0040 ATGGACTTCCAAGTGGTTGTTCTCGCCGGTGGTACCTCCAACAAACTCCTTCCTCTCGTCTCCAAGGAGGTTCCGAAACCTTTACTTCCCGTGGCAAATAGGCCAGTTCTATCTTACGTTCTTGAGTTGTTGGAGCTCAGTAACCTTAAAACGCTCATAGTGGTAGTTGAAGGCGAAGAAGAAGCTATTCATGTCGGTGGTTGGATATCAGGGGCTTATGTCGATCGTTTGAATGTTGAGGTTGCTGCAGTCCCTGAGGATGTGGGAACAGCTGGTGCAATTCGGGCTATTGCACACCACTTAACTGCTAAAGACATCTTGGTTGTCAGTGGTGATCTCGTTTCTGATGTACCTCCTGGTGCCATTGCTGCTGCTCATAGAAGACATGATGCAGTGGTTACTGCAATGCTTTGCCCTGCTCCTGTTAGTGGATCTTCAGAGTCAGGAACCTCTAGTGGGAAAGACAAAACCAAGAAAGTTGGTCGCCACGACTTAATTGGGCTGGATCCCACAACACAGTTTTTACTGTACATTGCAACTGGTGCTGAATTGGAAAAAGATGTTCGAATTCAGAAGAGCATACTTCGGGCAGTTGGTCAGATGGAGATAAGAGCTGATCTTATGGATGCTCATTTGTATGCATTCAAGAGATCAGTTCTACTTGAAGTTTTGGATCAAAAGGCCACATTTCATAGCTTAAAGCAGGATGTATTGCCTTACCTAGTCCGGAGCCAACTGAGATCAGAAGTTTTGTTCAATGGTACACCACAAACTGAAGAAAATGGATCTGAGAAGGTTATATCACAGAGCAATGAACAAATGTTATCTCAAATCCTCTCTAATGCGACTCATCCAACATTACATCGACAATATGCGCTGGGTCCTAATGGTTCTACTTCTGCTGGAAGAACTCATAAATGCTGTGTTTATATTGCTGAAAGCAGCAAGTATTGTGCACGCTTAAATTCTATTCAAGCATACAGTGACGTAAATCGAGATGTGATAGGAGAAGCTAGTCATTTATCAGGGTATTCCTTCTCTGCTCACAACAATATTATCCATCCTTCTGCAGAACTTGGAGCAAAAACCACCGTAGGACCACATTGTATGCTGGGTGAAGGTTCACAGATGAGTGACAAATGCAGTGTTAAAAGGTCTGTTATTGGTCGTCACTGCCGGATAGGTGCCAATGTCAAGATTGTTAATTCCATAGTCATGAATCATGTTACTATTGGAGATGGTTGCTCGATCCAAGGCTCTGTCATCTGCAGCAATGTGCAGCTCCAAGAGCGTGTTGTGCTAAAAGATTGTCAAATTGGAGCAGGTTTTGTTGTCACTGCGGGAAGTGATTACAAAGGAGAAGTATTGGCTAGGAAATAA 1380 0.437 MDFQVVVLAGGTSNKLLPLVSKEVPKPLLPVANRPVLSYVLELLELSNLKTLIVVVEGEEEAIHVGGWISGAYVDRLNVEVAAVPEDVGTAGAIRAIAHHLTAKDILVVSGDLVSDVPPGAIAAAHRRHDAVVTAMLCPAPVSGSSESGTSSGKDKTKKVGRHDLIGLDPTTQFLLYIATGAELEKDVRIQKSILRAVGQMEIRADLMDAHLYAFKRSVLLEVLDQKATFHSLKQDVLPYLVRSQLRSEVLFNGTPQTEENGSEKVISQSNEQMLSQILSNATHPTLHRQYALGPNGSTSAGRTHKCCVYIAESSKYCARLNSIQAYSDVNRDVIGEASHLSGYSFSAHNNIIHPSAELGAKTTVGPHCMLGEGSQMSDKCSVKRSVIGRHCRIGANVKIVNSIVMNHVTIGDGCSIQGSVICSNVQLQERVVLKDCQIGAGFVVTAGSDYKGEVLARK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0040 459 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 459 - -
Lele21g0040 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Lele21g0040 459 Pfam Nucleotidyl transferase 6 149 IPR005835 GO:0009058|GO:0016779
Lele21g0040 459 CDD LbH_eIF2B_gamma_C 370 449 - -
Lele21g0040 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 344 IPR029044 -
Lele21g0040 459 Gene3D Hexapeptide repeat proteins 349 453 - -
Lele21g0040 459 CDD eIF-2B_gamma_N 3 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0040 Lele-ChrLele21 299351 304344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0040 3 449 Eukaryotic Initiation Factors Gene Family AT2G34970 23.374 2.32e-19 89.4