Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0026 ATGGCTTCATTTTCTTGGCCATTGACATTAGAGATTATACGTAATGTATTGTTATCAGGATTTTCAGAAATCCTTAAGGACGAAGAAAGTAAAGGGTGTGGGTCTGGCGCAGTGGAGTTGGTTATGCAGATGTGGTCTCTGATAGCGGGCAGGATCCCTGGGAGAACCGATAATGAGATCAAGAACTACTGGAATACCCATCTCAGCAAGAAGCTCATCAGCCAAGGCATCGATCCCCGCACCCACAAGCCCCTCAACCCTAATACCCAGCCATCAACCAGTGCTGCTCCATGTTCTCGTCATCATTATTCATCCTCCAACCCCTCTGCTACCACTAAACCTAATCGTAATGATAAATCTCCAATTACTGAGCAGGACCCCAATCCCTACTGTGATGACGCCACTCCTTCCCATCACTTGGATCCTTATGATCAGGCATTGGCCCTCGGGGATCTGTCCGCAATCCCCTTGGCCAATACCCCCAGCAATGACGACGACGAAGATATCAACTACTGTACCGACGATGTCTTCTCCTCTTTCATCAACTCACTGATCAACGACGATGCCTTTTCTGCTCAACAGCAGCAGCAGCACCCTCCACCACCTCCTTATAATGGTGTGCCCTGGGAATCTTCACTGGTCTCCGCCCACGACGATCCTAACAATAATATGTCTGATGCAGATGGTGTCCACTAG 696 0.4885 MASFSWPLTLEIIRNVLLSGFSEILKDEESKGCGSGAVELVMQMWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPNTQPSTSAAPCSRHHYSSSNPSATTKPNRNDKSPITEQDPNPYCDDATPSHHLDPYDQALALGDLSAIPLANTPSNDDDEDINYCTDDVFSSFINSLINDDAFSAQQQQQHPPPPPYNGVPWESSLVSAHDDPNNNMSDADGVH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0026 231 Pfam Myb-like DNA-binding domain 45 68 IPR001005 -
Lele21g0026 231 PANTHER F14D16.11-RELATED 45 213 - -
Lele21g0026 231 SUPERFAMILY Homeodomain-like 44 77 IPR009057 -
Lele21g0026 231 MobiDBLite consensus disorder prediction 191 231 - -
Lele21g0026 231 MobiDBLite consensus disorder prediction 77 142 - -
Lele21g0026 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 72 IPR017930 -
Lele21g0026 231 MobiDBLite consensus disorder prediction 81 124 - -
Lele21g0026 231 CDD SANT 38 68 IPR001005 -
Lele21g0026 231 Gene3D - 17 125 - -
Lele21g0026 231 ProSiteProfiles Myb-like domain profile. 45 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0026 Lele-ChrLele21 239561 242089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0026 39 187 MYB Transcription Factor Family AT3G13540 43.333 4.25e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele21g0026 Myb_DNA-binding 8.6e-06 CL0123