Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g0016 ATGAATGGAATTGTGGAGAATTTATTGATAGAAAAGTTGATTTTAACCCAGGAAGCGGAAACCCTAGCCCCGTGGCAGTCAGCCCTGCCTCATTTGCGAACCAGGGAGACGATGGGGGCTTACAAGTACGTATCGGAGCTATGGCGGAAGAAGCAGTCCGATGTGATGAAATTCTTGCAGAGAGTGAGATGCTGGGAGTATCGTCAGCAGCCGTCGATCGTGCGTGTGACGAGGCCAACCCGACCTGATAAGGCTCGTCGCTTAGGGTACAAGGCTAAGCAGGGCTACGTGGTTTACCGTGTTCGTGTGAGGAGAGGGGGTCGCAAGAGGCCTGTTCCCAAGGGTATTGTCTATGGTAAGCCTACCAATCAAGGTGTTACCCAACTCAAATTTCAACGCAGCAAGAGGTCTGTTGCTGAGGAGCGAGCTGGCCGCAAGTTGGGTGGCCTCAGGGTTCTCAATTCTTACTGGGTCAATGAGGATTCAACCTACAAGTACTACGAGATCATCCTTGTGGATGTTGCCCACAACGCCATTCGCAATGACCCAAGAATCAATTGGCTCTGTAACCCCGTCCACAAGCACAGGGAGCTCCGGGGCCTCACTTCTGCCGGCAAGAAATACAGGGGCTTGCGTGGCAGGGGACATCTTCATCACAAAGCTCGTCCGTCTCGCAGGGCCACCTGGAAGAGGAACAATACCCTCTCCCTTCGTCGCTACCGCTGA 726 0.5331 MNGIVENLLIEKLILTQEAETLAPWQSALPHLRTRETMGAYKYVSELWRKKQSDVMKFLQRVRCWEYRQQPSIVRVTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYYEIILVDVAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLHHKARPSRRATWKRNNTLSLRRYR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g0016 241 Pfam Ribosomal L15 39 227 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lele21g0016 241 PANTHER RIBOSOMAL PROTEIN L15 38 241 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lele21g0016 241 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 38 232 IPR012678 GO:0003735|GO:0005840|GO:0006412
Lele21g0016 241 FunFam Ribosomal protein L15 38 241 - -
Lele21g0016 241 SMART Ribosomal_L15e_2 39 230 IPR000439 GO:0003735|GO:0005840|GO:0006412
Lele21g0016 241 ProSitePatterns Ribosomal protein L15e signature. 83 106 IPR020925 GO:0003735|GO:0005840|GO:0006412
Lele21g0016 241 Gene3D Ribosomal protein l15e 38 241 IPR024794 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g0016 Lele-ChrLele21 156238 160794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g0016 38 241 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.667 4.46e-127 356