Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1443 ATGGATTTTAGTTTGATGTCACACTTCGATCGTTTCAGAAGTTCTGCCAATTCATTCCTTTCGCAATACGAACCAATTGTTCTGCTTTTCTCTCCTCTGCTTGCTGTCCTTCTCGCTCACACAATTCGATCGTTTGTTCATGTCGTTCATGATAAAGGACTTAAACCCACTCTTCTAGGACTACTCGTCAACTCTATCAAACTGATCCCTGGGGTGAAGAGTTACATCAATGCCGAAAAACAGAAGGTTGTGGATAAGTTGCAGTCTGACAGTAAATCTAAAAGGGAAGGTTGGAGAACAGAGTTACCAAGGGCAGGACTAGGGATGGAAGTTCTTGAGAAAATGAGAGATGAGAAAAGAAATGATGTGATTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAATTTGATGCACACTTTTCTTTGATAAATGAGGCATGCTCAATGTTTGCGCATACCAATCCCCTGCATTTGGATGTATTTCAAAGTGTTGTACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCTGCACTTCTTGGAGGTAAAGAAAAGAGTTTGGGGGGACAAATTTGTGGAAATATGACATCAGGAGGGACTGAAAGTATATTATTAGCTGTCAAATCATCACGTGACTATATGAAGTCTAAAAAAGGAATTACAAGACCTGAAATGATAATACCTGAGTCTGCACACTCAGCATATGACAAGGCTGCTCAATACTTTAACGTCAAACTCTGGCGCGTTCCTGTTAACAAAAGATTTCAAGCAGATCTGAAAGCAATTCGACATCATATTAACAAAAGTACCATCTTGATTGTTGGTTCTGCCCCTGGATTTCCTCATGGAATAATTGACCCCATTGAAGAACTTGGTGACCTGGCATCAACCTTTGGAATTTGCTTTCATGTTGACCTCTGTCTTGGTGGCTTCGTATTACCTTTTGCTAGAAAGCTTGGGTACTCCATTCCACCTTTTGACTTTTCTGTTAAAGGAGTTTCTTCAATATCAGTGGACGTACACAAATATGGTTTAGCTCCTAAAGGAACAAGTATAGTACTATACAGGAACCATGACATCAGAAAGGTAACTAATTGGTTTACTGAAGAATGTAAAGGCAATCCCGAGATGAAATATGTTGAAGCAAGCCACTGA 1164 0.4038 MDFSLMSHFDRFRSSANSFLSQYEPIVLLFSPLLAVLLAHTIRSFVHVVHDKGLKPTLLGLLVNSIKLIPGVKSYINAEKQKVVDKLQSDSKSKREGWRTELPRAGLGMEVLEKMRDEKRNDVIWQGKCSGTVYIGGSEFDAHFSLINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGGKEKSLGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESAHSAYDKAAQYFNVKLWRVPVNKRFQADLKAIRHHINKSTILIVGSAPGFPHGIIDPIEELGDLASTFGICFHVDLCLGGFVLPFARKLGYSIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHDIRKVTNWFTEECKGNPEMKYVEASH 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1443 387 PANTHER - 37 378 - -
Lele20g1443 387 Gene3D - 141 385 IPR015421 GO:0003824
Lele20g1443 387 SUPERFAMILY PLP-dependent transferases 76 367 IPR015424 -
Lele20g1443 387 Pfam Pyridoxal-dependent decarboxylase conserved domain 147 363 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele20g1443 387 FunFam sphingosine-1-phosphate lyase 1 140 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1443 Lele-ChrLele20 18414572 18418783 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1443 156 362 Calmodulin-binding Proteins AT3G17760 26.457 7.64e-14 70.9