Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1442 ATGGAGGTCATACCACTGCCACCCACTTCTGTTACTGAGTGGTCTGGTGGGTTGTATGTTTCTCCCACCATGGCTGGAAGCAGGCCTGGAGGTCTGATTGCTGGGGCTTGGGCAGCAATGATGTCCTTAGGGGAAGAAGGTTACATGGAGAATACAAAATCAATTATGGACGTTTCAAAAAGAATACAGGAAGGCATAGGAGAGATTCCAGAATTATTCATCGTTGGAAAACCGGACATGACAATTGTGGCTTTTGGATCTGATGTTCTAGACATATTCGAAGTCAATGATATCATGTCATCCAGAGGGTGGCATTTGAATGCATTGCAGAGACCAAACAGCATCCATATCTGCCTGACACTGCAGCATTTGGCGGTTGTTGAAGACTTCCTCAGGGATTTAAAGGAATCTGTGATAACCGTAAAAGAAAATCCTGGTCCAGTAAGTGGAGGGTTAGCACCTATATATGGTGCGGCAGGGAAGATGCCTGATAGAGTTATGGTACAGGAATTGCTGGTAGATTTCATGGACGGTTCAAGGACTCAAGTTGAGATTAGCTTTAAAGATGTTCTTGTTGAGTCAGATGCCGGTGATAACTGGCAAGCATTGATATCCCATTTCCCTGATAATATGCATGCCCACAAGGAAGGTCCAACCGCCATTTACTTGCAATGA 675 0.4474 MEVIPLPPTSVTEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSLGEEGYMENTKSIMDVSKRIQEGIGEIPELFIVGKPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICLTLQHLAVVEDFLRDLKESVITVKENPGPVSGGLAPIYGAAGKMPDRVMVQELLVDFMDGSRTQVEISFKDVLVESDAGDNWQALISHFPDNMHAHKEGPTAIYLQ 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1442 224 Gene3D - 142 181 - -
Lele20g1442 224 FunFam Sphingosine-1-phosphate lyase 1 31 143 - -
Lele20g1442 224 FunFam Sphingosine-1-phosphate lyase 1 141 179 - -
Lele20g1442 224 Gene3D Aspartate Aminotransferase, domain 1 24 141 IPR015422 GO:0003824
Lele20g1442 224 PANTHER - 9 178 - -
Lele20g1442 224 SUPERFAMILY PLP-dependent transferases 9 141 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1442 Lele-ChrLele20 18399542 18404762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1442 23 139 Calmodulin-binding Proteins AT5G17330 30.400 6.28e-07 47.8