Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1431 ATGGCCGCTGGTCGCTCTTTCCTTCGCTTGCCTCTCTTCCTCCTAACTCTCTCTTTCTCTCCCACTTGCCTCTCCAATTCTGAGGACGACGCCCTCCTCCAACTCAAACGATCCTTCTCCCCTTCCTCCTCCCTCTCTTCCTGGATCCCCAATTCCTCTGCCTGCTCTGCCAAGTGGATCGGCGTCTATTGCAACAACAACCTCGTCGTCGGTTTGCACCTCTCTAACATGACTCTCTCTGGCAACATTGACATCGATGCCCTCCTTCGCCTCCCTCACCTCCGTAGCATTGGCTTTGTCAACAACTCCTTCTCTGGTCCCATCCCCCAATTCAATAGACTCCCCACTCTCAAGGCTCTCTTCTTGACCACCACTCATTTCTCCGGCACCATCCCTTCCGATTTCTTCACTAGCTTGGCCGCCATCAAGAAAATCTTCCTCTCCGGCAATAACTTCTCCGGCGACATACCCAACTCTTTGGCCAAGCTCCCCTTGCTCGTAGAGTTGCGCCTTGAGGACAATGAATTCTCAGGAGCTATTCCGTCTTTCAGTCAACAATTTCGATCATTCAACGTTTCCAACAACCATTTGGAGGGACCTATCCCCGATGAATTGGCTAGGTTCGACGTGACATCCTTCTCTGGAAACCCGGGATTATGCGGGAAAGTAGTGGAGAAGGAGTGCAAGGAGGGCGAGCAGCAACAAGGAGCAACGAGCGGGGAGAAACAAAGTAGTAGTTTGGTGAGGGTGGTAATTATGGTTATAATGGTTTTAATGGCAGTGATGTTGCTATTTGTATTGATAAAGACGGCAAGGAGACGAGAGGGGAACAAAAATATGGGGGTCAGAAAAGACGGGGGAGGGGAAGAGATGGTGCAAGTGCATGTGCCCGGCTCGAACCATAGCAGGACATCGGGATCAACGAAGAAAGGCTCAAATTATGTTTCAAAAAGGAATGCGATAGGGGACTTGGTGATGGTGAACGAGGAGAAGGGCGTGTTTGGGCTGTCTGATTTGATGAAGGCTGCTGCCGAGGTGTTGGGGAATGGCGGCATGGGCTCTGCTTACAAGGCCACCATGGTCAATGGATTGTCGATGGTGGTCAAGAGGATGAGGGAGATCAACAAGATCAGCAGAGATTCCTTTGACGCCGAGATGAGACAATTCGGCAGAATCAGACATCCCAATGTTCTCACCCCTTTGGCCTACCACTATCGCAAGGAGGAGAAGCTCATTGTGTCTCAATACATTCCCAAAGGCAGTTTGTTGTATGTATTGCACGGCGACAGAGGAAAATGCCATGGCGACCTCAACTGGCCTACCAGGTTGAAGATTGTGAAGGGAATCGCGAGTGGCTTGAGTTTCCTGCATTCTCAATTTGGATCCCATGATCTGCCCCACGGAAACCTCAAGTCAAGCAATGTTCTCTTGAGTGATGCATACGAGCCACTCCTCAACGACTTCGCCTTTCATCCGCTCATCAATCCAAACAAGGCTCCCCAGGCGCTGTTTGCCTACAAAACTCAAGATTACATACAGTACCAGCAAATGTCCCGGAAAACCGATGTATATTGCTTCGGAATCATCATCCTGGAAATCATGACCGGCAAATTCCCTTGTCAATATCATAGCAACGGCAAGGGCGGCACCGATATTGTGCAGTTGGTGCTGACGGCCATCGCGGAGGGAAGAGAAGCCGAAGTGATAGATCCTCAAATTCAAACTAACAACACCGACTCCCTCAATCACATGTTACAGCTTCTCCAGATCGGGGCTAATTGCACCGAATCCAATCCTCAACAACGACTGAACTTAGTGGAAGCCATTAGAAGGATAGAGGAGGTTCAAGTCTAA 1854 0.5 MAAGRSFLRLPLFLLTLSFSPTCLSNSEDDALLQLKRSFSPSSSLSSWIPNSSACSAKWIGVYCNNNLVVGLHLSNMTLSGNIDIDALLRLPHLRSIGFVNNSFSGPIPQFNRLPTLKALFLTTTHFSGTIPSDFFTSLAAIKKIFLSGNNFSGDIPNSLAKLPLLVELRLEDNEFSGAIPSFSQQFRSFNVSNNHLEGPIPDELARFDVTSFSGNPGLCGKVVEKECKEGEQQQGATSGEKQSSSLVRVVIMVIMVLMAVMLLFVLIKTARRREGNKNMGVRKDGGGEEMVQVHVPGSNHSRTSGSTKKGSNYVSKRNAIGDLVMVNEEKGVFGLSDLMKAAAEVLGNGGMGSAYKATMVNGLSMVVKRMREINKISRDSFDAEMRQFGRIRHPNVLTPLAYHYRKEEKLIVSQYIPKGSLLYVLHGDRGKCHGDLNWPTRLKIVKGIASGLSFLHSQFGSHDLPHGNLKSSNVLLSDAYEPLLNDFAFHPLINPNKAPQALFAYKTQDYIQYQQMSRKTDVYCFGIIILEIMTGKFPCQYHSNGKGGTDIVQLVLTAIAEGREAEVIDPQIQTNNTDSLNHMLQLLQIGANCTESNPQQRLNLVEAIRRIEEVQV 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1431 617 SUPERFAMILY L domain-like 25 214 - -
Lele20g1431 617 FunFam Nuclear pore complex protein NUP107 25 182 - -
Lele20g1431 617 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Lele20g1431 617 Pfam Protein kinase domain 345 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1431 617 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1431 617 SUPERFAMILY Protein kinase-like (PK-like) 345 612 IPR011009 -
Lele20g1431 617 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Lele20g1431 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 616 - -
Lele20g1431 617 Gene3D Transferase(Phosphotransferase) domain 1 417 617 - -
Lele20g1431 617 Gene3D Ribonuclease Inhibitor 22 101 IPR032675 -
Lele20g1431 617 Gene3D Ribonuclease Inhibitor 102 237 IPR032675 -
Lele20g1431 617 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Lele20g1431 617 Gene3D Phosphorylase Kinase; domain 1 308 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1431 Lele-ChrLele20 18313567 18315420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1431 6 617 Receptor kinase-like Gene Family AT3G42880 48.107 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele20g1431 Pkinase 2.6e-25 CL0016