Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1415 ATGTCCACTCCCAGTCCTCCATCATGCCCCGCCCCCATGAAGGCCACCTCCAATGGCGCCTTCCAACATGAAAACCCCCTCGACTACGCTCTCCCCCTCTTGATCCTCCAGATATGCCTCGTCGTCGCCTTCACCCGCTTCCTCGCCTTCCTCTTGCGTGCCCTCCGTCAACCTCGTGTCATTGCTGAAATCATTGGGGGAATCATACTGGGACCTTCTGCAATTGGTCGAAGCCACGCATTCCTCAACACCGTCTTCCCCAAGAAAAGCTCCACCGTTCTTGAGACCCTCGCCAACGTTGGTCTCTTGTTCTTCTTGTTTCTCGTGGGCCTGGAGCTCGACATGCGTTCCATAAAACGAACGGGTCATAAGGCCCTGGGCATTGCCTTTGCCGGTATATCCGTCCCTTTCATTCTTGGCATTGGCACCTCTTTTGTTCTTCGATCCACCATCTCCAAAGGCGTTGAGCCCACCGCCTTCCTCGTCTTCATGGGAGTTGCTCTCTCCATTACCGCCTTTCCCGTGCTCGCTCGTATCCTTGCCGAGCTCAAGCTCCTTACCACCGACGTCGGTCGAATAGCCATGTCTGCCGCTGCCGTCAATGATGTTGCCGCCTGGATTCTTCTCGCTCTCGCCATTGCCCTCTCTGGCTCCCACACTTCTCCTCTCATTTCTCTGTGGGTTTTGCTCTGTGGTGCTGCTTTTGTCCTTTTTTGTGTCTTTGCCATCAAACCTATTCTCGTATTCATGGCCAAGCGTTCCCACGAGGGTGAGCCTGTTAAGGAGCTCTACATATGTGTCACTCTGACAATAGTCTTGGCCGCTAGTTTTGCCACTGACACCATTGGTATTCATGCCCTGTTTGGTGCATTTGTGATTGGTATCATCATGCCCAAAGACGGTCCTTTTGCTGGGGTCTTAATTGAGAAGCTTGAGGACATCATCTCCAGTCTTTTTCTACCGCTTTATTTTGTGTCTAGTGGGTTGAAAACAAATGTGGCGACCATAAGCGGAGGAACTTCGTGGGGGTTATTATTTCTGGTCATATTTACTGCTTGCTTTGGAAAGATTGTTGGCACGGTTGTTGTGGCTGTTATGTGTAAAATGCCTTTCCGAGAGGCCCTTGCTCTTGGTTTTCTCATGAACACCAAAGGCTTGGTCGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTATTGAATGACCAGACATTTGCCATATGTGTCCTAATGGCGTTGTTCACCACCTTCATCACAACCCCGATAGTGATGGCCGTGTATAAGCCAGCTCGCAGGGGAGCACCTTACAAGCACAAAACAATTCAACGTAAAGACCGAGACACAGAGTTTCGAGTGCTTGCTTGCTTCCACAGCACACGCAACATTCCTACTCTCATCAATCTGATTGAGTCCTCTCGCGGAACCCGAAAACGAGGAAAGCTCTGCATCTATGCAATGCACTTGATGGAGCTCTCAGAGCGATCTTCAGCCATCTCAATGGTCCACAAGGCACGCAACAACGGCCTTCCTTTTTGGAACAAGATACAGGAAGATAGAGACCAAATGGTGATCCCATTTGAAGCCTACGGTCAGCTGAGCAGTGTGAATGTTCGTCCCATGACGGCTATCTCTGCTCTCAACACCATCCACGAGGACATATGTACCAGTGCTCACCACAAGCGAGCAGCCATGATCGTCCTCCCATTCCACAAACACCAGCGTGCTGATGGATCCATGGAGTCACTCGGACATTCGTTCCGCCTGGTAAACCAAAATGTGCTCACCCACGCTCCTTGCTCTGTGGGAATTTTGGTGGATCGTGGGCTCGGAGGGACAAGCCAAGTACAAGCCAGCGATGTGTGCTATAAAGTAATGGTGCCCTTCTTTGGAGGGCGAGATGACCGAGAAGCACTGGCCTATGGAATGAGAATGGCGGAGCACCCTGGAATTTTGCTGACGGTGGTGAAGTTTGTGCCTCCACCAGGGAAGACATTCACGTTTGGGGCGAATATAGTGGCGGTGACGGCGGATAAGGACAAGAAAGTGATAAAAGGAGAAGATATTAGTTCAGACTATGACAAGCAAGAGGACGATCAAATGTGGACGGAGTTCAAGAGCGCTCAAAGCTCGAACCAAGAGTCGATGGGGTATGAAGAGAGATTAGTGGAAAGCAAAGGAGGTGTCATAAAAGCTCTGAAGGAAATGAATAAGAGCAGTCTAGTGGTGGTGGGGAGGATGCCTCCGGTGGCGCCGTTGGTAGAGAATAGTGATTGCAAAGAGTTAGGTCCAATCGGAAGCTACTTGGCATCTTCAGATTTCTCCACCACTGCGTCAGTGGTGGTGATTCAACAATATAATCCTTCCAAAGATTTTCATCCCTTGGTGATGGAGGTATCTGATTACCCAGAGGTTCCGGACACGCCAAGATATATCGTGTAG 2442 0.5037 MSTPSPPSCPAPMKATSNGAFQHENPLDYALPLLILQICLVVAFTRFLAFLLRALRQPRVIAEIIGGIILGPSAIGRSHAFLNTVFPKKSSTVLETLANVGLLFFLFLVGLELDMRSIKRTGHKALGIAFAGISVPFILGIGTSFVLRSTISKGVEPTAFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIALSGSHTSPLISLWVLLCGAAFVLFCVFAIKPILVFMAKRSHEGEPVKELYICVTLTIVLAASFATDTIGIHALFGAFVIGIIMPKDGPFAGVLIEKLEDIISSLFLPLYFVSSGLKTNVATISGGTSWGLLFLVIFTACFGKIVGTVVVAVMCKMPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDRDTEFRVLACFHSTRNIPTLINLIESSRGTRKRGKLCIYAMHLMELSERSSAISMVHKARNNGLPFWNKIQEDRDQMVIPFEAYGQLSSVNVRPMTAISALNTIHEDICTSAHHKRAAMIVLPFHKHQRADGSMESLGHSFRLVNQNVLTHAPCSVGILVDRGLGGTSQVQASDVCYKVMVPFFGGRDDREALAYGMRMAEHPGILLTVVKFVPPPGKTFTFGANIVAVTADKDKKVIKGEDISSDYDKQEDDQMWTEFKSAQSSNQESMGYEERLVESKGGVIKALKEMNKSSLVVVGRMPPVAPLVENSDCKELGPIGSYLASSDFSTTASVVVIQQYNPSKDFHPLVMEVSDYPEVPDTPRYIV 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1415 813 PANTHER CATION/H + ANTIPORTER 8 787 - -
Lele20g1415 813 FunFam Cation/H(+) antiporter 15 33 435 - -
Lele20g1415 813 Gene3D - 521 746 - -
Lele20g1415 813 Pfam Sodium/hydrogen exchanger family 40 423 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele20g1415 813 Gene3D - 33 435 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1415 Lele-ChrLele20 18221484 18224128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1415 2 804 Antiporter Super Family AT3G17630 70.311 0.0 1123