Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1412 ATGGAAGGAAAAGAATTGGCGGAAGCTGAGGAAGGGCCACCACGCACATGTGATAATAATATTACAGATGCATCACGGAAGAATGATACTCTGGGATTCACTATTCTCAGTTTGAGTGTGAATAACCCATCAGAAGTGAAGCCTCACAAAATTGAAGAACAGTCCGCAGCCCAATTGGGATTGCTGAGAGACAAGCTAGAGGAAATGAAGAAAGAGAATCAGAATCTAAGAGCTATGCTGTGTCAGATCACTCAACATTACGCCGTTCTTCAGAATCGCCTACTTATGACGATGCAGCAGCAGCCGCAAGAACAGCCGCCTCTAAAGTATCATAATTTGCAGAAAGACAATAAAGGAGATGACGAGGAGGAAGCGTTACCTATGCGGCAGTTCTTGGATATACATGAGCCTTCACCTTCAGAAAGCATTATGTGCAGCAAACCTGCATGTGAAGCTAACAGCAACATTGCAAAGAACATAGAGGATGATCAAGCATCTGATCAGGCAAATTCTTGCAGAAAAGTTAGAATCGGTGATGGGTGCCAATGGAGAAAGTATGGACAAAAGATAGCCAAGGGAAACCCATGTCCTAGGGCTTACTATCGTTGCAACTTGGGAACTGCTTGTCCAGTTCGCAAGCAGGTGCAAAGGTGTGCTAAGGACAAGAGTATTGTGATTACAACCTATGAAGGGAAGCATAATCACGCACTCCCAGCAGCAGCCACGCCCATGGCGGCCGCCACATCAGCAGCACTGAGCATGTTCCTCTCTGGCTCAACCACCAGTGCACATGGAAGCACACAATCAAGCTCAGGCCTCTTCTCTTCTGCATTTGCTTCCTTGTCCAACACCTCATCATGTCCCACCATAACACTAGACTTGACCCACCCCTCCAATCAATACATGCAATTCCTAATGTCTGCCTCATCAAGCCACTCCCACCACCCATTTCCTTTTGCTTTGAATGGTTACGACACTCAACAATCTCACTGCTCATCCTCGTCTTCGCAGAAGAACGTGTCCTTGGTAGATGTCATCAGTGCGGCTTTAGTTAAAGATCCTTCATTCAAGGCCGCTTTAGCTGCGTCCATTTCCTCATTTGCTGGAGCCAATTCATTACAGCGTTAA 1128 0.4637 MEGKELAEAEEGPPRTCDNNITDASRKNDTLGFTILSLSVNNPSEVKPHKIEEQSAAQLGLLRDKLEEMKKENQNLRAMLCQITQHYAVLQNRLLMTMQQQPQEQPPLKYHNLQKDNKGDDEEEALPMRQFLDIHEPSPSESIMCSKPACEANSNIAKNIEDDQASDQANSCRKVRIGDGCQWRKYGQKIAKGNPCPRAYYRCNLGTACPVRKQVQRCAKDKSIVITTYEGKHNHALPAAATPMAAATSAALSMFLSGSTTSAHGSTQSSSGLFSSAFASLSNTSSCPTITLDLTHPSNQYMQFLMSASSSHSHHPFPFALNGYDTQQSHCSSSSSQKNVSLVDVISAALVKDPSFKAALAASISSFAGANSLQR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1412 375 MobiDBLite consensus disorder prediction 1 24 - -
Lele20g1412 375 Gene3D WRKY domain 164 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele20g1412 375 SUPERFAMILY WRKY DNA-binding domain 175 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele20g1412 375 Coils Coil 52 82 - -
Lele20g1412 375 Pfam WRKY DNA -binding domain 179 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g1412 375 ProSiteProfiles WRKY domain profile. 179 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g1412 375 SMART WRKY_cls 177 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g1412 375 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 46 371 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1412 Lele-ChrLele20 18205592 18207734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1412 52 367 WRKY Transcription Factor Family AT4G04450 35.468 4.17e-52 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele20g1412 WRKY 2.1e-22 CL0274