Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1408 ATGGTCATCTTACGACTGGGCAACTCCGAGACGGAGAAGAAAGAAGGGATGAAGCTTGCCAATTACGAAATTGGTAAAACTCTGGGCACTGGCAGTTTCGGAAAGGTGAAATTGGCCAAACATATCCATTCCCATCGACTCTTTGCCCTCAAGATCATCGACAAGACCAAAATCATCCGCCTCAATATCGCTCATCAGATAAAGAGGGAGATAGCCACCCTCAAGCTTCTCAAGCATCCTAACGTGGTCATATTACACGAGGCCTTCTTTACTGTTTTGGCTAGCAAAACGAAAATTTACATGGTCTTGGAGTACGCCACTGGAGGAGAATTGTTTGACAGAATTGCATCCAAAGGTAGGCTTAATGAAGCTGAAGGTAGGAAGCTTTTCCAACAGTTAATTGATGGTGTGAGCTACTGCCACCATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATCTACTTGTGGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTCAGTGCTTTGCCCCAGCACAGTAGGGCCGACGGGTTGCTGCATACAACCTGTGGAAGTCCCAGCTATGTTGCTCCAGAGGTCATTGCCAATAGAGGCTATGAAGGCGCAACATCAGATACATGGTCATGTGGTGTCATCTTGTTTGTAATTCTAACGGGATATCTTCCTTTCCAAGATCGGAACATTGTCGTTCTCTATCAAAAGATATCTAAAGGAGATGTCAAGATACCAAAATGGCTATCGCCTGGGGCCCAAAACTTGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTGGCCGGTATCAAAGAAGATGAATGGTTCAGGCAGGGCAATGTTCCAGCAAATCCTGAGGACAAAGAAGAGGAAGAGAAAGACAATGTGTCTATCGACGATGAAGCCTTTTCAACCCATGACGTGCCGCACGAAGCAGAACAGAAGAGTCCTGACTCATCAACCCTTATCAATGCATTTCAGTTGATAGCAATGTCTTCATGCTTAGACCTCTCAGGCTTCTTTGAGGAAGAGGATGTTTCTGAGAGGAAGATGAGATTTACATCCAACCATTCAGCAAGAGATCTGATCGCAAAGATTGAAGATATTGGAACAGAAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAATTGAAGGTGATAAAAGAGAATAAGGAACACAGAAGTCTAGTGGGCATCGCGGTGGCAGCAGAGGTGTTTGAAATAAATCCATGCTTGCATGTGGTAGAGTTAAGTAAATCGTATGGAGACTCTTCTCTATATGGACAGCTGTGCAAGAAACTATCAGATGATTTGGCAGTGGGCCCGAGCCAAGAGCTTCTAAAATCAGAAGTGGGAGACGTCGGAGATAAGAGTTAG 1392 0.4476 MVILRLGNSETEKKEGMKLANYEIGKTLGTGSFGKVKLAKHIHSHRLFALKIIDKTKIIRLNIAHQIKREIATLKLLKHPNVVILHEAFFTVLASKTKIYMVLEYATGGELFDRIASKGRLNEAEGRKLFQQLIDGVSYCHHKGVFHRDLKLENLLVDAQGNIKITDFGLSALPQHSRADGLLHTTCGSPSYVAPEVIANRGYEGATSDTWSCGVILFVILTGYLPFQDRNIVVLYQKISKGDVKIPKWLSPGAQNLLRRILDPNPLTRITLAGIKEDEWFRQGNVPANPEDKEEEEKDNVSIDDEAFSTHDVPHEAEQKSPDSSTLINAFQLIAMSSCLDLSGFFEEEDVSERKMRFTSNHSARDLIAKIEDIGTEMGFRVQKKNGKLKVIKENKEHRSLVGIAVAAEVFEINPCLHVVELSKSYGDSSLYGQLCKKLSDDLAVGPSQELLKSEVGDVGDKS 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1408 463 Pfam Protein kinase domain 22 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1408 463 Gene3D Kinase associated domain 1, KA1 323 445 - -
Lele20g1408 463 Gene3D Phosphorylase Kinase; domain 1 8 107 - -
Lele20g1408 463 CDD CIPK_C 329 443 - -
Lele20g1408 463 ProSiteProfiles NAF domain profile. 323 347 IPR018451 GO:0007165
Lele20g1408 463 SUPERFAMILY Protein kinase-like (PK-like) 20 319 IPR011009 -
Lele20g1408 463 FunFam Non-specific serine/threonine protein kinase 325 446 - -
Lele20g1408 463 Pfam NAF domain 326 384 IPR004041 GO:0007165
Lele20g1408 463 ProSiteProfiles Protein kinase domain profile. 22 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1408 463 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 428 - -
Lele20g1408 463 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Lele20g1408 463 Gene3D Transferase(Phosphotransferase) domain 1 108 286 - -
Lele20g1408 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Lele20g1408 463 SMART serkin_6 22 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1408 463 FunFam Non-specific serine/threonine protein kinase 15 325 - -
Lele20g1408 463 FunFam Aurora kinase A 14 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1408 Lele-ChrLele20 18186882 18190777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1408 92 452 CBL-interacting serine-threonine protein kinases AT3G17510 66.298 2.45e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele20g1408 Pkinase 2.4e-67 CL0016