Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1391 ATGGCAAGACAGCCCCGTATAAATTCTGCATTAGTTATTGCAATTCGTATGGCCAAAGTATCCAAAAACACTGGTTCTGGAGAAATATCTAAAGTTTACCATGTTATGCATAACCAAGACAGGCCAGAGAAGCCATCTACAACAGAGCGGGCACAAAGGAATGACATGGCAAATGCGGCTAGTGGTAAAAATTTTGTAACTGTGCCTAAGGATCATTTTGGTCCAAGCCCTGCGGAGAATGATCCGGTGAGGAATCAAGGTGTGCTGGTTGGAGAATGTTGGAAAGATAGGCTTGAATGCCGACAATGGGGTGTTCACTTACCTCATGTTAGTGGTATCGCTGGACGGTCAAACTATGGTGCACAATCAGTAGTTCTTTCTGGAGGTTATGTTGATGATGAGGATCGTGGAGAATATTTTCTTTACACAGGAAGTGGCGGTAGAGACCTGAGAGGTAATAAAAGAACGAGCAAAGTGAAATCGTTTGATCAAAAGTTTGAGAAGTCTAATTTAGCTCTCAAAGCCAGTTCTTTAAAAGGTTATCCGGTTCGAGGGCTGAGATCTCATAAAGAGAAGCGCTCTTCCTATGCCCCTGAGAAAGGGTTACGCTATGACGGTATCTATAGAATCGAGAAATGCTGGCAAAAAATGGGAAAGCAGAATTCGATGCCCACAAGAGAACTCGAAGTGACCAAGGAGGAGACAGATGCTGGAGCCAAAGGCAATGGCAAAAGAAAGAGAGATGGCGCTGAACAAGTGATGCTAAGATCCCCATCAGGGCCTCCGGGAATTCCTATGATCCTCAACACAACAGTACGTGTAGTCCAATTCTATATCTATGATAGGCAGAGAGTTTTGGCATATGCGAATGTGAATCAAGTGGCAGGTTCAAGATACATTTCCCAATATGACCTATAA 918 0.4368 MARQPRINSALVIAIRMAKVSKNTGSGEISKVYHVMHNQDRPEKPSTTERAQRNDMANAASGKNFVTVPKDHFGPSPAENDPVRNQGVLVGECWKDRLECRQWGVHLPHVSGIAGRSNYGAQSVVLSGGYVDDEDRGEYFLYTGSGGRDLRGNKRTSKVKSFDQKFEKSNLALKASSLKGYPVRGLRSHKEKRSSYAPEKGLRYDGIYRIEKCWQKMGKQNSMPTRELEVTKEETDAGAKGNGKRKRDGAEQVMLRSPSGPPGIPMILNTTVRVVQFYIYDRQRVLAYANVNQVAGSRYISQYDL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1391 305 Gene3D - 54 244 IPR036987 -
Lele20g1391 305 Pfam SAD/SRA domain 85 222 IPR003105 -
Lele20g1391 305 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 221 IPR045134 -
Lele20g1391 305 SMART G9a_1 78 222 IPR003105 -
Lele20g1391 305 MobiDBLite consensus disorder prediction 224 260 - -
Lele20g1391 305 MobiDBLite consensus disorder prediction 226 252 - -
Lele20g1391 305 ProSiteProfiles YDG domain profile. 83 232 IPR003105 -
Lele20g1391 305 SUPERFAMILY PUA domain-like 56 223 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1391 Lele-ChrLele20 18087710 18091795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1391 1 223 C2H2 Transcription Factor Family AT5G39550 64.574 1.64e-100 305