Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1381 ATGGCTGAGTTTACAACAGATTTGCAAGCCTTTAGATCACCTTTTCGTTCCTTAGATATCGATCCAAGCATGGAACTGATAAATCAATTCACAGGGATGATGAGTCCGCGTGTCTTGGACAACTCAAATCTTAATTTTCAGAGCTTGGTGCCTTTCTCCTGTGACGCCTCCTTAGGCTTCCCTGAGCCTCAATTTGAAAGAAAATTGGAGGAAAATTTTCCTAGCCTTGTCCATCATGTCAATCACAATTCTGTACCAGTTTCTTTGCCCAATTTTCCTGAGGAAACTGAAATCCATGGAAGTAAAAAGAGGAAACCAGCAGATGTGCTAGAGGCCAGTTCTACAAACTCAACTTCTGCAGTTTTACCGAGTGGAAGAAAAATGAAGAGTAGTTTCAGAACAAGTAAGAGAGCAAAAAGCAATGAAACAGTTGTGGAGAATTCAAAGGAAGTGGTTCATGTCAGAGCCAAAAGAGGTCAAGCTACTGATAGTCACAGTTTAGCAGAAAGGGTTAGAAGAGGGAAAATCAATGAGAAGTTAAGGTGCTTACAGGACATTGTCCCAGGATGCTGCAAGACTATGGGTATGACAGTAATGTTGGATGAGATCATAAACTATGTTCAATCCTTGCAGAATCAAGTGGAGTTCCTCTCCATGAAGCTTACTGCAGCAAGCAACTTCTATGACTTCAATTCAGAGACAGATGCTTTGGAAACAATGCAGAGAGCAATGGCAGCTGAGGGAAAAGTGTTATCCAGACATGGGAGAGAAGGCTGCGTAGGAATTTCTTGTTTTCAACCAACCTGGCGCTTCTGA 816 0.4203 MAEFTTDLQAFRSPFRSLDIDPSMELINQFTGMMSPRVLDNSNLNFQSLVPFSCDASLGFPEPQFERKLEENFPSLVHHVNHNSVPVSLPNFPEETEIHGSKKRKPADVLEASSTNSTSAVLPSGRKMKSSFRTSKRAKSNETVVENSKEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQDIVPGCCKTMGMTVMLDEIINYVQSLQNQVEFLSMKLTAASNFYDFNSETDALETMQRAMAAEGKVLSRHGREGCVGISCFQPTWRF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1381 271 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 98 237 IPR024097 GO:0006355
Lele20g1381 271 MobiDBLite consensus disorder prediction 95 147 - -
Lele20g1381 271 CDD bHLH_AtBPE_like 150 235 - -
Lele20g1381 271 SMART finulus 166 216 IPR011598 GO:0046983
Lele20g1381 271 FunFam transcription factor BEE 3-like 157 228 - -
Lele20g1381 271 MobiDBLite consensus disorder prediction 110 129 - -
Lele20g1381 271 Pfam Helix-loop-helix DNA-binding domain 164 211 IPR011598 GO:0046983
Lele20g1381 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 210 IPR011598 GO:0046983
Lele20g1381 271 Gene3D - 156 229 IPR036638 GO:0046983
Lele20g1381 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 226 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1381 Lele-ChrLele20 18030018 18031321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1381 1 258 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 46.545 6.00e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele20g1381 HLH 0.00012 No_clan