Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1379 ATGTGTACGACAAGGAGAAAGGAGAATCAACCTAGTAAAGTTTTTGTCGGTGGAGGCGCCGTGGGATTCGTGCTCTTACTACAATCCATGAGTTTTGTGTTTAGATTATGCCCCTGCTTCAACAAGAGGTTCAAGGCCAACGCAGCCTCTGATTCCCACCATCCTCAAGCAGCCGACGATGTTGACAACACCTGGGACCTCTTCTTCGAACTCCACACTCTGCAGCTAGCCACCAACTTCTTCTCCGAGTTGAATCAGTTAGGTCATGGAGGGTTTGGTCCTGTTTACAAGGGATTGATGCCCAATGGTCAAGAAATAGCTGTGAAGAAGCTGTCTCTGGAATCAAGACAAGGAATTAGAGAATTTACCAATGAGGTCAAACTACTACTGAGAATTCAGCACAAGAACTTGGTTACATTATATGGGTGTTGTGCTGAAGGACCTGAAAAGATGCTTGTTTATGAGTATCTTCCAAACAAGAGTCTTGATCACTTTCTATTTGATTTTGGCCTTGCAAGACTATTTCCTGGGGATGACACTCATGTGCAGACATTTAAGATTTCTGGTACACATGGTTATATGGCTCCTGAATATGCAATGCGTGGATATTTGTCTGTGAAGACAGATGTTTTCAGTTATGGAATCTTGGTATTAGAAATTGTTAGTGGGAGAAGAAACCATGACCGGCTACTTGGTGAAGAGGAGGCAGATCTGTTGAACCATGCATGGAAGCTATATCAGGCGGGGAAGATAATGGATTTGATTGACACGAGCCTGGCCAAATACAATGGTGACGAGGCAGCGATGTGCATTCAGCTGGGCTTGTTGTGCTGCCAAGCAAGCATATCAGAAAGACCTGATATGAATGCCGTTCATCTAATGCTCTCAAGTGACTCGTTCACTTTGCCAAGACCTGGTAAACCTGGAATTCAAGGCCGTGTAGGACGTTGGACTACTACCACATCCTCTGTTTTCACCAATACTGCTACTACTGCAACCAAGGCTTCTGTCGGAAGTAGTATAGTTGAGGACAATTCTAGAAATTCTATCTCCACTTCTTCCTTTGATGAAGGAAGATGA 1080 0.4417 MCTTRRKENQPSKVFVGGGAVGFVLLLQSMSFVFRLCPCFNKRFKANAASDSHHPQAADDVDNTWDLFFELHTLQLATNFFSELNQLGHGGFGPVYKGLMPNGQEIAVKKLSLESRQGIREFTNEVKLLLRIQHKNLVTLYGCCAEGPEKMLVYEYLPNKSLDHFLFDFGLARLFPGDDTHVQTFKISGTHGYMAPEYAMRGYLSVKTDVFSYGILVLEIVSGRRNHDRLLGEEEADLLNHAWKLYQAGKIMDLIDTSLAKYNGDEAAMCIQLGLLCCQASISERPDMNAVHLMLSSDSFTLPRPGKPGIQGRVGRWTTTTSSVFTNTATTATKASVGSSIVEDNSRNSISTSSFDEGR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1379 359 Gene3D Phosphorylase Kinase; domain 1 43 151 - -
Lele20g1379 359 SUPERFAMILY Protein kinase-like (PK-like) 69 307 IPR011009 -
Lele20g1379 359 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 168 330 - -
Lele20g1379 359 FunFam Cysteine-rich receptor-like protein kinase 2 46 156 - -
Lele20g1379 359 ProSiteProfiles Protein kinase domain profile. 81 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1379 359 Gene3D Transferase(Phosphotransferase) domain 1 152 301 - -
Lele20g1379 359 Pfam Protein tyrosine and serine/threonine kinase 168 291 IPR001245 GO:0004672|GO:0006468
Lele20g1379 359 Pfam Protein tyrosine and serine/threonine kinase 84 166 IPR001245 GO:0004672|GO:0006468
Lele20g1379 359 MobiDBLite consensus disorder prediction 336 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1379 Lele-ChrLele20 18021904 18024333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1379 57 309 Receptor kinase-like Gene Family AT4G21410 43.131 6.39e-71 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele20g1379 PK_Tyr_Ser-Thr 9.7e-10 CL0016