Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1373 ATGGCGACCAAGCGCTTCTTTGATGACTCCAATGATCAAAACCCAGATGAGCCCCCTCATCAACGCATCAGACCCACTCTCGCTTCGGTGATCGGAGAAGTGGTAATGGTGAAAAACTTGCAGAACCTTCTCTCCAGCTTGGAACCTTTGCTCAGAAGGGCGGTGAGTGAGGAGGTGGAAGGAGTAATGAGACACATGTATCCGAGATCTATGAGCAGGTCTGCGTCGTTGAGGATACAAGCACCAGAGGAAGCGCCACATCTACAACTAATCTTTAAGGAGAGACTGAGCCTTCCTATATTCACGGGAAGCAAGATACATGACACAAATGGGAACCCAATTCATGTGGTTCTTGTAGACAAAAGTGGCGAACGAAGGGTTCCGACGAGCGTGCCTTATCCCATGAGGCTTGAAGTTGTGGTTCTGGACGGAGATTTCCCACCTGCTGATAAGCAAGAATGGACGAGCGAGGAATTCAACAGCCACATAGTGAGAGAGAGAGCAGGAAAGCGACCCTTGCTGGCTGGAGAACTCAGCATGACCATGAGAAATGGGATTGCATGTTTGGGTGGGGACATCGAGTTTACAGATAACTCGAGCTGGATCAGGAGTAGGAAGTTCAGAGTTGCTGTCAGAGTAGCTCCTGGCACCAACGAAGCTCCTGGGGTTCTTGAAGCCTTCACTGAATCTTTTGTCGTCAAGGATCATCGAGGCGAATTGTATAAGAAACACCATCCACCACTGTTGGAAGACGAAGTGTGGCGGCTGGAGAAGATTGGGAAGGACGGGGCATTTCACAAGAAGTTGTCCTCAAAGGGTATCAACAATGTTCAGGAATTTCTCAAGTTATCTGTGGTTGATCCTGCTAGACTCAGAGAGGTATTAGGTATAGGGATGTCGGAGAAAATGTGGGAAATTACGTTGAAGCATGCGAGGAGTTGTAAGATGGAGAACAAGATCTACATATACCGTGGGCCTCAGTTTGCGGTGTTTCTGAATCCCATATGCCAAGTGGTCAGAGCTGATATCAACGGCCACATACTCCGTGGCAGAGACCTCAACAACATGAATAGGAGCTATGTTCAGAAGCTGGTGAAAGAAGCATACGCCAGATGGGACACCTTGGAGGAAGCAGGGGCTGAAGAGCTTTTGAATGATAACGTGTCCTTGTTAACTCAAGGGGAAACGGTGGAGCAAATTCAAGTGAGTTGCGATCTCTTTGGCGAGAAATCAACAACACAAGTGGGCAGCTATGGAGACAGTGAGTGGTCGAATCCAACAACATACGCCCCCGTAATAGAGAATGCCTTTGCTTTCAGCTTGGCGGAGTCACAATCAGATGTTGATAATATGACACCTTCAGGCTCTCTCATCCATGGATCTCCCAAGTGGCCCTAA 1398 0.4835 MATKRFFDDSNDQNPDEPPHQRIRPTLASVIGEVVMVKNLQNLLSSLEPLLRRAVSEEVEGVMRHMYPRSMSRSASLRIQAPEEAPHLQLIFKERLSLPIFTGSKIHDTNGNPIHVVLVDKSGERRVPTSVPYPMRLEVVVLDGDFPPADKQEWTSEEFNSHIVRERAGKRPLLAGELSMTMRNGIACLGGDIEFTDNSSWIRSRKFRVAVRVAPGTNEAPGVLEAFTESFVVKDHRGELYKKHHPPLLEDEVWRLEKIGKDGAFHKKLSSKGINNVQEFLKLSVVDPARLREVLGIGMSEKMWEITLKHARSCKMENKIYIYRGPQFAVFLNPICQVVRADINGHILRGRDLNNMNRSYVQKLVKEAYARWDTLEEAGAEELLNDNVSLLTQGETVEQIQVSCDLFGEKSTTQVGSYGDSEWSNPTTYAPVIENAFAFSLAESQSDVDNMTPSGSLIHGSPKWP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1373 465 Pfam Calmodulin binding protein-like N-terminal domain 88 236 IPR046831 -
Lele20g1373 465 PANTHER OS02G0177800 PROTEIN 1 449 IPR012416 GO:0005516
Lele20g1373 465 MobiDBLite consensus disorder prediction 1 19 - -
Lele20g1373 465 Pfam Calmodulin binding protein C-terminal domain 319 377 IPR046829 -
Lele20g1373 465 MobiDBLite consensus disorder prediction 1 22 - -
Lele20g1373 465 Pfam Calmodulin binding protein central domain 249 314 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1373 Lele-ChrLele20 17992310 17995154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1373 4 387 Calmodulin-binding Proteins AT4G25800 48.462 1.41e-116 353