Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1367 ATGCCTGATGCAACAGAGGCTTCACAATCACAGCACGTCAAATGCACGAGGCCCAGGACTCAATTCGCGCATCTCATTTCCCTAACAGATCCCAACCCACAAATCCCATCCCTGCCCCAATCCACTCGCCGCAAACCCACCATTTCCTCTATCCTCTCTGCCTCCTACCACGACACTTCCGGTGAAACCGCACGGCCCAGCCTCAATGCCGACAAGAAGAAGACCAATTTCTCCGCCGCAACCTTCAGAGGATTCGGCTGCACTGCGGGCGCCTCGCGCCAGGTATCGATTCCCTCGGTCATTCGGACCTCGGTTGATTGGCGACAGACCAAAGCCAGAAAGAAGAAGCACAAGAGGAATGGTGCCACCAATGTGAGCGGTCAAGGCGTTCTTGATGGTTCAAATCCTGTTTCCGTTAGTTGTGTTGATTTCCAAGATGTTTGGTGTGGCCCTGGAATTGGGTTTTCGGCGGATGTTGCTGCCCCTGAGGATAGCGTGGTCGTAAGGAAGAATGGCCCTACCAGAGGGAAGACTGATTTGGAGAAGATGACCCACAGCCACAGGGAGTCGTGTGTCTTTTCATATTTGGTTGCTGCTGGGCCAATGAAGATGCTGCTGCTTCAAAGAAATCTGCTAATGGGGGGAAGATTGAATTCTCGCGACCATTTTAGAGACTGGAGACTTGATGTTGATAACATGTCTTATGAGCAATTGCTGGAGCTTGGTGAGAGGATTGGTTATGTGAACACTGGACTTAAAGAAGACGACATAGGGCGTTACATTAGGAAGTATAATCTTTCCAAGTTTAAGGAGACTTCAAATCGTCAAGTTGACAAGAAGTGCTGCATTTGTCAGGTGAGCTTGTTAGAATTAAGTTCCTCATTTAAAGGTTTGTCACAGTGCTCTACTGCTTTAATCCATATTGCACGCCGTGTACAGGAAGAATACGAAGCTGATGATGAGGTGGGAAGGCTAAGTTGTGGACACGACTATCACTTTCAGTGTTTAAGGCAATGGCTCGAACAGAAAAATTGCTGCCCAGTGTGTAAGCAAGAAGTTGTCAGTCGTCACTCCGCGGCCAAGTCCTGA 1089 0.4904 MPDATEASQSQHVKCTRPRTQFAHLISLTDPNPQIPSLPQSTRRKPTISSILSASYHDTSGETARPSLNADKKKTNFSAATFRGFGCTAGASRQVSIPSVIRTSVDWRQTKARKKKHKRNGATNVSGQGVLDGSNPVSVSCVDFQDVWCGPGIGFSADVAAPEDSVVVRKNGPTRGKTDLEKMTHSHRESCVFSYLVAAGPMKMLLLQRNLLMGGRLNSRDHFRDWRLDVDNMSYEQLLELGERIGYVNTGLKEDDIGRYIRKYNLSKFKETSNRQVDKKCCICQVSLLELSSSFKGLSQCSTALIHIARRVQEEYEADDEVGRLSCGHDYHFQCLRQWLEQKNCCPVCKQEVVSRHSAAKS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1367 362 ProSiteProfiles Zinc finger RING-type profile. 281 350 IPR001841 -
Lele20g1367 362 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 35 353 IPR045191 GO:0061630
Lele20g1367 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 359 IPR013083 -
Lele20g1367 362 Pfam Ring finger domain 314 350 IPR001841 -
Lele20g1367 362 MobiDBLite consensus disorder prediction 108 129 - -
Lele20g1367 362 SUPERFAMILY RING/U-box 277 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1367 Lele-ChrLele20 17969730 17971891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1367 11 236 C3H Transcription Factor Family AT1G73760 34.657 1.41e-28 110