LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele20g1364	ATGGGAATTCTTGTTGCAGAGAAAGGGAAGCTTATTGGGGTATTGCTTGCTCTTCAGTTTTGCCTTGCAGGATTTCATATTGTCTCTAGACTTGCACTCAACATAGGAGTCAGCAAAGTTGTTTTCCCTGTTTACAGAAACTTGCTTGCCCTGCATTTGTTGAGCCCACTTGCTTATTTCTTTGAAAAGATCACGGTAAACCAAGTTTTTTACTTGTTGGGATTATATTATGAATCTCCAACTCTTGCTTATGCAATGCAAAAGTCAGTTCCAGCCATCACTTTTGTTATGGCTTCAGCTCTAAGGGGGTGCAACTGTAAGTATTCTTTACAAAGGCCCTCCTCTTCTGCTCCAAATAGAAGGATACACCTTAGAAGTAGACCAGTATTCAACAAATACGCAAAACTGGACTTGGGGTTGCATATACTTGATTGGGAATTGTTTACCGTGGGCTGCATGGCTCCTGTGTTGAAGCATTATCCGGCAAAACTAACACTCACATCATTTACATGCTTCTTTGGACTGATTCAATTCTTGATAATAGCAACCTTTGTAGAAACTGACTGGGAGCATTGGAAGATACAATCTGCAGTGGAGCTTTTCACTATTTTATACGCTGGAGTTGTTACATCACGCACTGTTGTATCTCTCCAGACATGGTGTATTCAGAAGAGTGGCCCTGTCTTTGTGGCTGTTTTCCAGCCCCTACAGACCTTTCTAGTTGCTATCATGGCAGCCCTTATTTTTGGAGATCAGTTATATTCTGGAGGTGTTAGCAGCATCTCAACTTGTAAACCAAAGTCCAAATTGAAGAGAAAACGTTACATACTGATTACAAGTGCTCCTTTGATTCAAATCTCTGGGGAAGATGGATTGTTCACAGTTGACATAGAACGAAATAAGCAAAAAAGATTAGAAACAAGTCAGCTCGCACTCTCCGGTGCTTCTATGGCAACATCGTTTGCATCAGTCACTGGTCTCAGCTTATTGGCAGGAATGGCTAGTGCATTGGATACCTTATGTGGCCAATCATATGGGGCAAAGCAGCACCGCATGTTAGGGAAACACATGCAGAGGGCCATGCTAGTTCTTGTGATTGTTAGCATTCCTTTATCCATTGTTTGGGCGAACACAGGATCCATTCTAATTGCCTTAGGCCAAGATCCTGAGATATCTGCAGAAGCAGAACAGTATGCTCAATTCATGATTGCAAGCATCTTTGCCAATGGCCTTCTGCAATGCCTCAACAGATTTTTACAAACCCAAAATATTGTATTTCCAATGATGTTCCGTTCTGGAGTTACTGCTTTACTACATATTCTCCTGTGTTACATTATGTCTGAGATTGATAAAAAACATTGCCTCATGGGCAGCTTGGAAATTTGGTCATTTGAAATGATGGTTCTCTTGTCTGGTTTGCTTCCAAATCCAAAGTTGGAAACATCAGTGCTCTCTATCTGCCTTAACACGGTATCAGTTGTATGGATGGTTCCCTTTGGACTCAGTGGAGCTGTAAGCACTCGTGTCTCAAACGGACTAGGAGCTGGTCACCCGCATACTGCTCGATTAGCAGTGCGTGTTGTGCTAGTAATGGCCACTATTGAGGGCATCTTAATCGGAACGGTGACGATACTAATACGGAATATTTGGGGAAATGCTTTTAGTAACAAAGTAGAAGTGGTCAAATATGTAGCAACCATGTTGCCAATTCTTGCCATATCCAACTTTCTGGATGGACTCCAATGTGTTCTTTCAGGCACGGCAAGAGGATGTGGTTGGCAGAAAATCGGAGCTTTTGTGAATCTTGGGTCATACTATCTGGTTGGGATTCCATCTGCTGTCATACTTGCTTTTGTTTTGCACATTGGTGGCAAGGGACTTTGGCTGGGCATCATATGTTCGCTCCTGGTTCAAGTGTTATGCTTATTGATAATCACTATTCGTACTGATTGGGACCAAGAGGCAGTTAAAGCTAAAGATAGAGTCTATGATTCAATTAACAAAGAGGGCATAGTCTCCTGA	2022	0.4214	MGILVAEKGKLIGVLLALQFCLAGFHIVSRLALNIGVSKVVFPVYRNLLALHLLSPLAYFFEKITVNQVFYLLGLYYESPTLAYAMQKSVPAITFVMASALRGCNCKYSLQRPSSSAPNRRIHLRSRPVFNKYAKLDLGLHILDWELFTVGCMAPVLKHYPAKLTLTSFTCFFGLIQFLIIATFVETDWEHWKIQSAVELFTILYAGVVTSRTVVSLQTWCIQKSGPVFVAVFQPLQTFLVAIMAALIFGDQLYSGGVSSISTCKPKSKLKRKRYILITSAPLIQISGEDGLFTVDIERNKQKRLETSQLALSGASMATSFASVTGLSLLAGMASALDTLCGQSYGAKQHRMLGKHMQRAMLVLVIVSIPLSIVWANTGSILIALGQDPEISAEAEQYAQFMIASIFANGLLQCLNRFLQTQNIVFPMMFRSGVTALLHILLCYIMSEIDKKHCLMGSLEIWSFEMMVLLSGLLPNPKLETSVLSICLNTVSVVWMVPFGLSGAVSTRVSNGLGAGHPHTARLAVRVVLVMATIEGILIGTVTILIRNIWGNAFSNKVEVVKYVATMLPILAISNFLDGLQCVLSGTARGCGWQKIGAFVNLGSYYLVGIPSAVILAFVLHIGGKGLWLGIICSLLVQVLCLLIITIRTDWDQEAVKAKDRVYDSINKEGIVS	673

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele20g1364	673	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	179	254	-	-
	Lele20g1364	673	PANTHER	MULTIDRUG RESISTANCE PROTEIN	454	651	-	-
	Lele20g1364	673	CDD	MATE_eukaryotic	307	657	IPR045069	GO:0042910\|GO:1990961
	Lele20g1364	673	Pfam	EamA-like transporter family	162	258	IPR000620	GO:0016020
	Lele20g1364	673	Pfam	MatE	308	445	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085
	Lele20g1364	673	Pfam	MatE	455	615	IPR002528	GO:0015297\|GO:0016020\|GO:0042910\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele20g1364	Lele-ChrLele20	17940078	17945408	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele20g1364	4	258	Nodulin-like Gene Family	AT3G18200	55.263	3.04e-91	287