Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1350 ATGATATATACAGTAGAAGCAGAGTTTTTCTCCGAATACGGAGAGGCAAGTAGATACCAGGTCCAAGAAGTCATTGGTAAAGGAAGTTATGGCATTGTGGGTTCTGCCACTGACACTAATACTGGTGAAAAGGTTGCTATAAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACGAGGATCTTAAGAGAAATTAAACTCCTTCGATTGCTCAAACATCCTGATATAGTAGAAATTAAGCATATCATGCTTCCTCCTTCTCGACGAGAGTTCAGGGATATCTATGTCGTGTTTGAGCTGATGGAATCTGACCTCCATCAAGTAATAAAGGCCAATGATGATCTTACTCCGGAGCATCACCAATTTTTCTTGTACCAACTTCTTCGGGGACTGAAATATATACATACTGCTAATGTGTTTCACCGTGACTTAAAGCCGAAAAATATTCTTGCTAATGCCGATTGCAAACTAAAGATATGTGATTTTGGACTTGCTCGAGTTTCATTTAATGATGCTCCATCAACTATATTCTGGACGGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTATGTGGTTCATTTTTCTCAAAATATACCGCTGCAATTGATATTTGGAGCATTGGATGCATTTTTGCAGAAATTCTCTTAGGGAAGCCATTGTTTCCTGGGAAAAATGTGGTGAACCAGTTGGATCTCATAACTGATTTACTTGGGACTCCTCCTGCTGAATCCATTGCGAGGATTCGAAATGAGAAGGCTAGAAGGTATCTTAGTGGCATGCGTAAAAAGAAACCAGTTCCATTTTCCCAAAAGTTTCCTAATGCTGATCCGTTGGCTCTTCGTTTGCTCCAGCGCCTGCTTGCATTTGATCCTAAGGATCGTCCAACTGCTGAAGAGGCATTAACTGATCCTTACTTCAAAGGTTTGTCGAATGTGGATCGCGAACCATCTACCCAACCCATTTCAAAACTTGAGTTTGAGTTTGAGAGGAGAAAATTGACTAAAGATGACGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTACCATCCGCAGATGCTCGAGGAATATCTTTGTGGTGGAGAGCAGACCCATTTTATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTGTGGCAAAGGTCAGGGTGGGGTTCCATTGCTGAGACAGCAGGCCTCCTTACCTCGAGAGCGAGTTTGTGCAGCCAAGGATGAAAAGAAGGAAGGTGTTGGAACAACGGTTGAGGGTGCTCCCAGCTGTATGGGGACAGACGCTAACTCTAACGCCAACACGCGTAGCTTGTTCAAGAGTGCCAGCATTAGTGCATCCAAGTGCATAGGTGTGAAATCACGCGACAACCTCAAGGAGGAGCCAATTGAGGAGGTGAATGATGAGGCAGTAGATGAGATGACAGAGAAGATGGATGTCCTCAATGCTTGA 1476 0.4329 MIYTVEAEFFSEYGEASRYQVQEVIGKGSYGIVGSATDTNTGEKVAIKKINDVFEHVSDATRILREIKLLRLLKHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSTIFWTDYVATRWYRAPELCGSFFSKYTAAIDIWSIGCIFAEILLGKPLFPGKNVVNQLDLITDLLGTPPAESIARIRNEKARRYLSGMRKKKPVPFSQKFPNADPLALRLLQRLLAFDPKDRPTAEEALTDPYFKGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLEEYLCGGEQTHFMYPSGVDRFKRQFAHLEEHCGKGQGGVPLLRQQASLPRERVCAAKDEKKEGVGTTVEGAPSCMGTDANSNANTRSLFKSASISASKCIGVKSRDNLKEEPIEEVNDEAVDEMTEKMDVLNA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1350 491 CDD STKc_TDY_MAPK 18 355 - -
Lele20g1350 491 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Lele20g1350 491 FunFam Mitogen-activated protein kinase 6 113 - -
Lele20g1350 491 Coils Coil 479 491 - -
Lele20g1350 491 FunFam Mitogen-activated protein kinase 334 356 - -
Lele20g1350 491 ProSitePatterns MAP kinase signature. 54 157 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele20g1350 491 SUPERFAMILY Protein kinase-like (PK-like) 15 315 IPR011009 -
Lele20g1350 491 Pfam Protein kinase domain 19 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1350 491 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 357 - -
Lele20g1350 491 ProSiteProfiles Protein kinase domain profile. 19 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1350 491 Gene3D Transferase(Phosphotransferase) domain 1 105 333 - -
Lele20g1350 491 SMART serkin_6 19 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1350 491 FunFam Mitogen-activated protein kinase 105 333 - -
Lele20g1350 491 Gene3D Phosphorylase Kinase; domain 1 35 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1350 Lele-ChrLele20 17888159 17891737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1350 2 491 MAP Kinase Gene Family AT3G18040 76.772 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele20g1350 Pkinase 1e-66 CL0016