Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1348 ATGAGGATACATTCAGACCAGTGTGGTTGGAATTGTAAACCGAGGCGGGAAAGTTATTGCTTCAAGAGGCTTAAGTTTTCGGTTTCTCTAGCATTCGGTACTGTACCTGATCGAAAAGATATGAAGAACATTCTTAAGAAGCTTCATATAATGTCTAATCGATCAGAAGATGCGGCATCATCCACTTCATCAAAAGGCCAGAGGTCCAATGATGGTCCATTCTCCAAGAAGCCATCAAACTCTCACCCCCCTCAAAGTTCTGAGCATAAAACCTTTCCCGGGATTTCGAGCTGGTTGCACTCGGTTGCTAACAGGCAGAGTCCCAGTCCTCCATCTTCGAATCTGAAAAGAGGAGAAACAGTGGAACCATCCGATTTGGTTAGCAGTGGCGTTTTGGATATTGTTTCAGATTCAGCGAGGCGTGATTCCGGGTCTAGCGCTTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAATTGGCTTTAGAGATGAGTGCAAAGGAGGATCCCGAGGCAGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGTTCTTGTGGCCCTGATAATACACCAGCGGAAGTTGTGGCCTACAGATACTGGAATTACCATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTCTATGATTTTTATGGGATCTTAAATGAGTCTCAGTCAACCTCTGCAAAAATGCCTTCCCTGGTGGATCTGCAAGGGACACCAACATCAGATAGTGTCACTTGGGAAGCGGTCTTGGTCAATAGAGCTGCAGATTCAAATTTGTTGAAACTTGAGCAAAAAGCCCTAGAGTTGGCTGTCAAGTCAAGGCCAAATTTTGAAGTAGTTATAAGTAACTATTTGGTGCAGAAGCTTGCCATATTAGTGGCTGACTATATGGGCGGACCGGTTACAGATCCTGAAAGCATGACAAGAGCATGGGGGAGTCTTAGTTACAGTCTGAAAGCAACTCTTGGTAGCATGGTTTTGCCACTTGGTTCTCTGACCATTGGATTGGCTCGGCACCGTGCATTGTTATTTAAGGTTTTATCTGATAGCGTGCGCATCCCATGCTGCTTGGTCAAAGGACTACATTATACAGGTTCTGATGATGTGGCCATGAACTTTGTCAAGGTTGACGATGGAAGGGAATACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCAGCTGGATCAAATATCGAGTATGACGAATCTTTTTATGTGGCCAGTCCTTTGTCAAGGGACATTGATTCCTCTCGTGTAGCATCATCCAGCAGTGGGATTGGAAGTTCATCTGAAGAAGCTTCAGACTTTGGTACATTTGATAAAAGAAACATATCAAAACAGATTGCCTATTTGGGCAAAGAATCTTGTGTAACAAATCCCACTACAAGTGAAGACGAATCAAAGAGCCCATCGAATGATTTCAAATGTGCCCCTAATGAGGAAAAGTTCACGGTGCAGGAAGCTCCTGGTAGACCAAATCATCCCTACGTTCATGCAAGATATCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCCGTACGTAGAATGAAAGTGAAAGATGTTTCACAATATATGATCGATGCTGCGAAGGGGAATCCTCAGTTAGCTCAAAAGCTTCACGATGTTTTACTTGAAAGTGGTGTTGTTGCTCCTCCAAACTTATTTTCTGAAACTTATCATCATCAGTTAGGTGCTCCAATCGTTGAAACTAACTCAAACAATCAGGAAAATGGATATGAACGGGAGAGCGAGAACCAGGTAACTCATGCTGATTCCCACCGGAATCCTGCTCAATTGTTGCCTCCTTTGCCGCCCTACAGAGCTCATCTTAAAGCAATTCCTAGCAGTCAGCTGGAGCATTCTAAACCTGTAGAAGGTTTAGGGATCAACCTTCCTTTGGATCCTAGGGAAGCAGCTGGACAGCACTTACAATCACACGCAGAAGCAACTCCTATAAGATATGGTAAAAAGGTACCGGTTGCTGCAGCAGCAGCTGCTGCTGCAGCTGTTGCTTCATCAATGGTAGTTGCTGTGGCAAAGTCAAGTACTGACTCAAATATGGAGCTTCCCGTTGCAGCGGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACCACTGCGGCTGTTGGTAAACAATATGAACAGGGAAGTCGAAGTGATGGAGATTCAGATGGTGCTTTTTATGAGCATAAGGGTAGTGATCAGGGAGAACATAGTGTTTTAGGAGCAAACTCAGAAGGTGAGAGAATATCTGACAGATCAATAAGTAATGATAGCACAAAATCTGATTCTGCTCTAGATGATGTTGCTGAGTGTGAAATTCCATGGGAGGACATCACATTGGGTGAACGTATTGGGCTTGGATCATATGGGGAGGTGTACCGGGGTGAATGGCATGGAACTGAAGTAGCTGTAAAGAGATTTTTGGATCAAGACATCTCTGGTGAATCTCTTGAGGAATTCATAAGTGAGGTCCGATTAATGAAAAGGCTCAGGCATCCAAATGTCGTTCTCTTCATGGGAGCTGTAACTAAACCTCCAAATCTTTCAATTGTTACAGAATTTCTTCCCAGAGGAAGTTTGTATAGATTAATCCACCGGCCCAACAATCAACTAGACGAGCGAAGACGGCTGAGGATGGCCTTAGATGCTGCACGAGGAATGAACTATTTGCACACCTGCTCTCCAGTGATAGTCCATCGTGATTTGAAGTCTCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGCGACTTTGGTTTATCACGAATGAAGCACAGTACATTCCTTTCCTCAAGATCAACTGCTGGAACAGCAGAGTGGATGGCTCCAGAAATGTTAAGAAACGAGCCTTCAAATGAAAAGTGCGATGTTTTCAGTTTTGGGGTCATATTATGGGAGCTGTCTACGATGCAGCAACCCTGGGGAGGAATGAATCCAATGCAAGTTGTTGGTGCCGTGGGTTTCCAGCATCGCCGACTTGAAATCCCAGATGATATGGACCCTGCCATCGCTGATATTATCAGAAAATGCTGGCAGACAGATCCAAAGTTGAGGCCGAGCTTTGCCGAAATAATGGCAGCTCTGAAGCCATTGCAGAAGCCAATTATTAGTTCACAAGTGCAGAGATCAAGCGCCCAGTCATCACGAGTGGCACAAGACCCGGCTGGATAG 3210 0.4474 MRIHSDQCGWNCKPRRESYCFKRLKFSVSLAFGTVPDRKDMKNILKKLHIMSNRSEDAASSTSSKGQRSNDGPFSKKPSNSHPPQSSEHKTFPGISSWLHSVANRQSPSPPSSNLKRGETVEPSDLVSSGVLDIVSDSARRDSGSSASRDPEVEEEYQIQLALEMSAKEDPEAVQIEAVKQISLGSCGPDNTPAEVVAYRYWNYHALGYDDKILDGFYDFYGILNESQSTSAKMPSLVDLQGTPTSDSVTWEAVLVNRAADSNLLKLEQKALELAVKSRPNFEVVISNYLVQKLAILVADYMGGPVTDPESMTRAWGSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLSDSVRIPCCLVKGLHYTGSDDVAMNFVKVDDGREYIVDLMADPGTLIPSDAAGSNIEYDESFYVASPLSRDIDSSRVASSSSGIGSSSEEASDFGTFDKRNISKQIAYLGKESCVTNPTTSEDESKSPSNDFKCAPNEEKFTVQEAPGRPNHPYVHARYPSWTEGISSPAVRRMKVKDVSQYMIDAAKGNPQLAQKLHDVLLESGVVAPPNLFSETYHHQLGAPIVETNSNNQENGYERESENQVTHADSHRNPAQLLPPLPPYRAHLKAIPSSQLEHSKPVEGLGINLPLDPREAAGQHLQSHAEATPIRYGKKVPVAAAAAAAAAVASSMVVAVAKSSTDSNMELPVAAAATATAAAVVATTAAVGKQYEQGSRSDGDSDGAFYEHKGSDQGEHSVLGANSEGERISDRSISNDSTKSDSALDDVAECEIPWEDITLGERIGLGSYGEVYRGEWHGTEVAVKRFLDQDISGESLEEFISEVRLMKRLRHPNVVLFMGAVTKPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHTCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEMLRNEPSNEKCDVFSFGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPKLRPSFAEIMAALKPLQKPIISSQVQRSSAQSSRVAQDPAG 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1348 1069 Pfam Protein tyrosine and serine/threonine kinase 789 1041 IPR001245 GO:0004672|GO:0006468
Lele20g1348 1069 MobiDBLite consensus disorder prediction 722 776 - -
Lele20g1348 1069 SMART serkin_6 789 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1348 1069 Pfam Ethylene-responsive protein kinase Le-CTR1 194 399 - -
Lele20g1348 1069 PRINTS Tyrosine kinase catalytic domain signature 902 920 IPR001245 GO:0004672|GO:0006468
Lele20g1348 1069 PRINTS Tyrosine kinase catalytic domain signature 968 990 IPR001245 GO:0004672|GO:0006468
Lele20g1348 1069 PRINTS Tyrosine kinase catalytic domain signature 1012 1034 IPR001245 GO:0004672|GO:0006468
Lele20g1348 1069 PRINTS Tyrosine kinase catalytic domain signature 863 876 IPR001245 GO:0004672|GO:0006468
Lele20g1348 1069 PRINTS Tyrosine kinase catalytic domain signature 949 959 IPR001245 GO:0004672|GO:0006468
Lele20g1348 1069 ProSiteProfiles Protein kinase domain profile. 789 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1348 1069 Gene3D Transferase(Phosphotransferase) domain 1 868 1053 - -
Lele20g1348 1069 MobiDBLite consensus disorder prediction 53 155 - -
Lele20g1348 1069 MobiDBLite consensus disorder prediction 581 605 - -
Lele20g1348 1069 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 154 173 IPR003903 -
Lele20g1348 1069 MobiDBLite consensus disorder prediction 467 486 - -
Lele20g1348 1069 ProSitePatterns Protein kinases ATP-binding region signature. 795 816 IPR017441 GO:0005524
Lele20g1348 1069 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 434 1053 - -
Lele20g1348 1069 FunFam Serine/threonine-protein kinase CTR1 868 1051 - -
Lele20g1348 1069 FunFam Serine/threonine-protein kinase isoform 1 780 867 - -
Lele20g1348 1069 CDD STKc_MAP3K-like 795 1041 - -
Lele20g1348 1069 SUPERFAMILY Protein kinase-like (PK-like) 772 1040 IPR011009 -
Lele20g1348 1069 Gene3D Phosphorylase Kinase; domain 1 782 866 - -
Lele20g1348 1069 MobiDBLite consensus disorder prediction 54 119 - -
Lele20g1348 1069 ProSitePatterns Serine/Threonine protein kinases active-site signature. 908 920 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1348 Lele-ChrLele20 17868098 17875227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1348 38 1061 MAP Kinase Kinase Kinase AT1G73660 63.127 0.0 1163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele20g1348 PK_Tyr_Ser-Thr 1.1e-67 CL0016