Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1343 ATGTGGATGGTGGGGCATAACGATGGTGTTGATATTAACGTTGTTGATCACTCATTCAGTGGCAGAAAGCTCAGGCCTCTCATTCCCAGGCCAGTGACTTCTTCCGATTATACTTCATCCACAACTCCCCCTTGCCTAAGAAGTATTCACGGCTCCGATTTGTTTACACAATATCACGATCTCACATCAACGACGGATCAGAGTAAGAAAGAGTTAAATACTCCACCAGTCGTGGTGAGCTCAAGGTGGAATCCTACTCCAGAACAGCTAAGCGCCCTTGAAGAATTGTATCGGCGAGGAACAAGAACGCCATCTGCTGAGGAAATTCAACATATAACTGCACAGCTGCGGAGATTTGGCAAAATTGAAGGGAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAAAGGCAGAAACGGCGCCGTCAGATGGAATCGGCTCCCCGTGATTTTGATAGTCTAGAGAAGGAAGACTTAGTTCCGGTTGAATCTGTGTCAATACCAAGAGCAACAAAAGCAGTGGCCGCATCAGAGCGAAGAACGGAATTACAGCAAAGAAGAAACTTGATGGAAAGGAATGCCACGTGGCGGATGATGCAGCTATCATGTCCTCTTCCCCATCCTGCGGCTTGCACCCACCTCATAAACACGTCTACAGCTAGTTTAACTGCTTCCACGAGCACGGTAACAGCGAGAGCGATTGACCCAAAGCTCATTAAGGCACATGATCTCAGCTTCTTTATATCGCCTCACAGGGAAAGCACGGTCATCCACTTTAACAGTGTCAGTGATGACCTAGTTGATCTCTGCGGTGAACCTAAAACCCTGGAACTTTTCCCTCTAAGAGGTGGGGATGGCAGTGATAGCGTCAACCATAAAGAGTGTGAGATTTCAGTTTCTGAATCAATGAATGCCAACTTGACACCAAGCCAGTTCTTCGAGTTCCTTCCCTTGAAGAACTAA 969 0.4654 MWMVGHNDGVDINVVDHSFSGRKLRPLIPRPVTSSDYTSSTTPPCLRSIHGSDLFTQYHDLTSTTDQSKKELNTPPVVVSSRWNPTPEQLSALEELYRRGTRTPSAEEIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAPRDFDSLEKEDLVPVESVSIPRATKAVAASERRTELQQRRNLMERNATWRMMQLSCPLPHPAACTHLINTSTASLTASTSTVTARAIDPKLIKAHDLSFFISPHRESTVIHFNSVSDDLVDLCGEPKTLELFPLRGGDGSDSVNHKECEISVSESMNANLTPSQFFEFLPLKN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1343 322 Coils Coil 175 195 - -
Lele20g1343 322 CDD homeodomain 82 142 IPR001356 GO:0003677
Lele20g1343 322 ProSiteProfiles 'Homeobox' domain profile. 86 141 IPR001356 GO:0003677
Lele20g1343 322 SUPERFAMILY Homeodomain-like 81 148 IPR009057 -
Lele20g1343 322 Gene3D - 80 147 - -
Lele20g1343 322 MobiDBLite consensus disorder prediction 64 83 - -
Lele20g1343 322 Pfam Homeodomain 81 140 IPR001356 GO:0003677
Lele20g1343 322 FunFam WUSCHEL-related homeobox 4 80 147 - -
Lele20g1343 322 SMART HOX_1 78 145 IPR001356 GO:0003677
Lele20g1343 322 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 66 317 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1343 Lele-ChrLele20 17845237 17847144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1343 1 322 Wox Gene Family AT3G18010 36.702 3.90e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele20g1343 Homeodomain 1.2e-19 CL0123