Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1335 ATGGACCAGAAAGAGCAGATAAAAAATGGTAGTAACCGCAATGACATATTCTCAATGGATTTTGTGATGGGAGGCATAGCAGCTATTATATCTAAGAGTGCAGCAGCACCAATAGAGAGAGTTAAGCTTTTATTGCAACATCAAGGGGAAATGATAAAGAGAGGACAAATCAAGAGACCATATTTGGCTGTATCTGATTGCTTCAAAAGAGTCTTGAGGGAGGAGGGTCTGTTTGCTATTTGGAGAGGGACCAAGCCAATGTTATACGATACTTCCCAACACAATACTCTGTCATTAGTAGAGGCTTTCAATTTTGCATGCAAAGGTTACTTCAAAAGCATTTCTGGGCATTCCAAAGAGAGAGATGGGTATATTAAGTGGTTTGCTAGAAATGTGGCTTCAGGCAGTGCTGCAGGAGCTACTAGTTCACTACTACTGTATCACTTAGATAATGCTCGTACCCCATTAGAAAGCCATGCCAGTGGGCAATTTTTTTGCTTCTTTCGTGTTGGGTTGGAGCATCCCGTCCTCTGCTGGGGTTTGCGCCTACCTTTTGACACACTTCGACGGAGAATGATGCTGACATCTGGACAGCTAAATAAGTATCGTAATGCATTGCATGCCTTTCATGAGATTGTGCGACATGAGGGTTTCTTTGCTCTATTTCGGGGAGTTACTGCAAATATGCTTCTTGGTGTCGCAGGAGTTGGGGTGCTTGCAGGATATGATCAGTTGTACCGCATCTCATCAAGACACGCTCTCTATAATGAGCCCAAACAGGGAGCTTTGAAATGA 795 0.4327 MDQKEQIKNGSNRNDIFSMDFVMGGIAAIISKSAAAPIERVKLLLQHQGEMIKRGQIKRPYLAVSDCFKRVLREEGLFAIWRGTKPMLYDTSQHNTLSLVEAFNFACKGYFKSISGHSKERDGYIKWFARNVASGSAAGATSSLLLYHLDNARTPLESHASGQFFCFFRVGLEHPVLCWGLRLPFDTLRRRMMLTSGQLNKYRNALHAFHEIVRHEGFFALFRGVTANMLLGVAGVGVLAGYDQLYRISSRHALYNEPKQGALK 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1335 264 Gene3D Mitochondrial carrier domain 11 161 IPR023395 -
Lele20g1335 264 SUPERFAMILY Mitochondrial carrier 18 244 IPR023395 -
Lele20g1335 264 Pfam Mitochondrial carrier protein 184 247 IPR018108 -
Lele20g1335 264 Pfam Mitochondrial carrier protein 20 100 IPR018108 -
Lele20g1335 264 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 183 252 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele20g1335 264 ProSiteProfiles Solute carrier (Solcar) repeat profile. 162 248 IPR018108 -
Lele20g1335 264 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 108 IPR018108 -
Lele20g1335 264 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Lele20g1335 264 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Lele20g1335 264 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Lele20g1335 264 Gene3D Mitochondrial carrier domain 162 253 IPR023395 -
Lele20g1335 264 PRINTS Adenine nucleotide translocator signature 126 139 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele20g1335 264 PRINTS Adenine nucleotide translocator signature 61 82 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele20g1335 264 PRINTS Adenine nucleotide translocator signature 17 29 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Lele20g1335 264 PRINTS Adenine nucleotide translocator signature 100 112 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1335 Lele-ChrLele20 17800919 17803318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1335 13 252 Antiporters AT5G17400 39.597 1.49e-53 174