Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1318 ATGTTGTTAGTAGTGTGGCTGTATGGGCTAATGGAAGTGCAATTTGAGGATGTGCACAGGCTTGGTGATGGTCAGGTGAAGCATTCTCCAGAAGTGTTCTATGCTGGTTCTCTATGGAAGGTCAGTGTACAGGCTTTTAATGATGAAGACCCCCAGGGACGGAGAACTCTCGGATTGTTTATTCACCGTCGTAAAGCAGAGATTGCTGATTTACAAAGAAAGGTGCACATGTATGTGGATTCTCGTGAAAAGGTGACTGCTCGCTATCAGCGAGTATTGCTTTCTTCGGTTGATCTCTTCTTCTTGCTGATTCTTTTAGCCTTCTCCCTTCGGAAATTCTGTTCCCGACCCATTTCTTATGCTAACACCAGCTCATCCATAGCTAGACCCTTTCTGTTTGAAAAGGACTCACACCACAAAGTTACTTCATCTTTCCATTTTCCTTTAGCTGTAGTCATTCTGTTGGCAATAGCTTACGTGGTTTTAAGCATCTTAACATTCACTCACGCCTCTCAGACTTCATGGAAACTGATAGAAGCTCTGTTTCGGAGTGATCAGGCAATAACCAACTTAGTGGTTGTTCTTGAGATGGTGAACAAGGAGAAGGTTAAATATACTAAATATCCTCTGTCACTCAGAATCTACTGGGCAGCAAATTTAGTTATTTCTAGCTTATTTTTTGCTTCGGCCATTTATCGTTTAGTAAACATTGGTGCAGCCAACTTGGAGTTTAATTTGAAAATTGACGCTATATTCTCGATTTTAAATATTCCCGTGGCTGTTTATGTATCATTAGTAGCTGTTAAAGGGTCATCGGGGATTCATGTAGTCAAAAGACCAGATTCTGATTCGAGCTTCGCAGAACCGTTGTGCCACAGGCTTTTCACAAAAGAGAATTTAAGTCCTTACGCTTATGCTTCCCTGTTCTCCAAAATGGTGTGGCTGTCGATGAACCCTCTGCTCCAAAAAGGCTACAACTCACCCCTTAAGCTTGATGATTTGCCTTCACTTCCTCCTGAGTTTCGAGCTGAGAAAATGTCAGAGCTTTTTGCGATGAATTGGCCGAACCCAGAGGAAAGTTGCAAACATCCAGTAGTAATCACACTACTCCGATGCTTCTGGAAACACGTAGCTTTCACTGGCAGTCTGGCAGCCATTCGGCTTGCGGTTTCGTTTGTGGGACCAGCTAATTGGGCTGGACAGATTGTGAATTACATGGCTGTGGATGCTCAGCAGCTAGCGGATACGATGCTGCAGCTGCATTCTATTTGGTTGACGCCTCTACAACTTGCAGCTGCTTTTGTTTTGATCTACTGCTATCTTGGCTTATCCAAATTTGCAGCCATGCTTGAGACCATTGCAATGTTTGCGTATGTACTACTGGGCACAAAAAGGAACAATACTTTCCAGTTCAGTATAATGGTGAATCGTGATTTGAGGATGAAGGCCATGACTGATATGCTTAATAATTTGCGTGTCACTAAGTTCCAAGCATGGGAGGAGCATTTTGGCAGCCAGATACGAAATTTTCGTGAGTTGGAGTATCATTGGATTGGAAACTTCATGTATGCTTTTGCTAACAGCATGGGAATTCTCGGGGTTTCTCCTACTATGATAGCAGTTCTTACCTTTGGAGTAGCAATTCTTCTGGGGTTTCATCTTGATGCTGGCATTGTGTTTATCGTAATGTCAGCGATCAAAATACTGCAAGAACCAGTCAGGACGTTCCCTCAGGCTCTTCTTTCGATCTCACAAGCAATGGTCTCCCTAGGGAGGTTGGATGAGTACATTAAAAGCAGGGAACTAGATGAAAGTTCGGTGGAGAGAGTGGAAGACAGTGAGAGTAACGTAGCAGTGGAAATAAAAGAAGGGTCAGAAGTGTATTGCCTGGAAAAGGATCTTGAGATGTTAGAATATGGAGACCAGACTGAGATTGGAGAAAGGGGCATAAACCTCAGTGGTGGCCAGAAGAAACGAGTACAGTTTGCTAGAGCTGTGTATCAGGACTGTGACATCTATCTCCTCGACGACCTTGATCTTTAA 2043 0.4337 MLLVVWLYGLMEVQFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFIHRRKAEIADLQRKVHMYVDSREKVTARYQRVLLSSVDLFFLLILLAFSLRKFCSRPISYANTSSSIARPFLFEKDSHHKVTSSFHFPLAVVILLAIAYVVLSILTFTHASQTSWKLIEALFRSDQAITNLVVVLEMVNKEKVKYTKYPLSLRIYWAANLVISSLFFASAIYRLVNIGAANLEFNLKIDAIFSILNIPVAVYVSLVAVKGSSGIHVVKRPDSDSSFAEPLCHRLFTKENLSPYAYASLFSKMVWLSMNPLLQKGYNSPLKLDDLPSLPPEFRAEKMSELFAMNWPNPEESCKHPVVITLLRCFWKHVAFTGSLAAIRLAVSFVGPANWAGQIVNYMAVDAQQLADTMLQLHSIWLTPLQLAAAFVLIYCYLGLSKFAAMLETIAMFAYVLLGTKRNNTFQFSIMVNRDLRMKAMTDMLNNLRVTKFQAWEEHFGSQIRNFRELEYHWIGNFMYAFANSMGILGVSPTMIAVLTFGVAILLGFHLDAGIVFIVMSAIKILQEPVRTFPQALLSISQAMVSLGRLDEYIKSRELDESSVERVEDSESNVAVEIKEGSEVYCLEKDLEMLEYGDQTEIGERGINLSGGQKKRVQFARAVYQDCDIYLLDDLDL 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1318 680 Gene3D ABC transporter type 1, transmembrane domain 384 598 IPR036640 GO:0005524|GO:0016020
Lele20g1318 680 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 399 585 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele20g1318 680 SUPERFAMILY ABC transporter transmembrane region 147 593 IPR036640 GO:0005524|GO:0016020
Lele20g1318 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 677 IPR027417 -
Lele20g1318 680 CDD ABC_6TM_ABCC_D1 399 593 IPR044746 GO:0140359
Lele20g1318 680 Pfam ABC transporter 613 677 IPR003439 GO:0005524
Lele20g1318 680 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 626 677 - -
Lele20g1318 680 Gene3D - 599 679 IPR027417 -
Lele20g1318 680 Pfam ABC transporter transmembrane region 397 572 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1318 Lele-ChrLele20 17710634 17715657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1318 614 677 Calmodulin-binding Proteins AT2G36910 39.062 6.42e-07 51.2