Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1317 ATGGACCCTCAATACCCTAAACCTCGATCCTATGCACCACAGATGGAGATGGCGATTCCCCCCTCCCAGCTTTCCGACAACGATAGGAGCAGCTCCGAACTGCGAGCTCTCGATTGCAACCTCACTTCGCTTTGCGACCATATCCAGATGGAAGGCTTCAATTCCGGCTCATTCTCCGACGTCGTGCTCCATGCAATGGGTTCCACTTACCACCTCCATCGCCTTATCCTTTCCCGGAGTTCTTACTTCAGAAATATGCTTCATGGTCCCTGGAAAGAAGCCAGTGCTCCTGTTGTGACCCTGCATGTTGATGATAAGAATGTTAATGATGAGGCAATCACAATGGCTTTGGCATATCTCTATGGGCACCACCCTAAGCTTAGTGATAGTAATGCATTTCGCGTTCTTGCTGCCGCATCCTTTCTTGACCTTCAGGACTTGTGTGCAATATGTACAGACTTCATTATATCCGAGCTGTGGACTTCAAATTTCTTGGCTTATCAGGTATTTGCAGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAAATGCTTGTTGGGGATACCTCTGTCAAAGTGGCGGCATGGAGTTGAAAGAGGTGCTTCCGAAACTTTCTTCTCAAACATTACATGCATTACTGACCTCTGATGAACTGTGGATACCAAGTGAAGAGATACGGTTTGAATTGGCATTACACACATTCCTGGCAAAAATTGCTCACTGGAAAGCTGAGCATCCTGAGCAAGGAAGTTCTGGTTCTGAGTCTGCGACTAATACCCATTCTGATTCTGATAATATTAAGGGAAAAAGTGGAGTTGATAGCTGCACAAGTAATAGGTTGGGAACTGTAGGGCGTCTGAATATTAAAAGTGATGTAAAGGAAACAGTTGATCATAGTCTGCGAGTTGAGGTTGCAGATGATGTGGCACACTTCAACAATGAGGATTCTGATTCTCATCAATTGTCACAAGCAACATCATTTGCTGGTTCATCAAATTTGGAACCTAGATATGCTTGCAACATGGAAGGGCCTTCGTCAATCAGTAATTTGTTCAGAGAAAAAGATGGAACCAGAACATCATGTTCTTATGTTGAGATGCCTCTCACTGCTGGAGCAAGTGGAGCGGCTATTGAAGGGTCATCTGAGGAAGGGTCAAATTTTTCCTGCAATGGCCCCACATCCAGTGATTGGGGAAGATACAGTGTGCCTCTTTTTCCATGGGGTGGCCGGGTAGTTGGTGTAAGACGGCTTAAAGATCACTCCAAAGGGAAGTATGGAATTCATGGGGATGAACATGAAGCATTTGTAAATATATTTGAAGGAGGTTCTCTTTTATATTGCAATATGTCTTTTGAGTCGCTTCTGAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGCCTTTGGCTGCAGATGCTTCTAAGTCAGAGGGTGCAAGAAATTGCTGCTGATACATGCAAATCTTGTTGCCTTGTGAGTGCAGCATGCACTTGCCGGCAGCCATTTGCATTTTCTCAGGGAGTTACGACCCCTAGTTACTACATGCAAGAACATAACCAGAATAATAATTCTGGGAACATGGGAAACATATATGTTGCTGAGTCTTCTCAAAGTCAAGGAAGTGGCATATTTAGACCCGTACGAATACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGTCGAGGAACTACATATGTGCCAACATCTGCTTCACCTCCTACACGTTTTGTCTTCTCTCGCGTGCCATTTGGTGTTGGCAACAGAAACTACCCACAATCTGCAGCTAATGATGATTCAGAGACACAAGCTGACCACAACGTAGACATGTCTGGGGATGGGTTGACGGCTTTGGTTGGGCTAAGCCAGGGAGGGAGTAGTGGAACCAATGCACATGGAGAGATGACACAAAGGGGTTATGAGACTGGCATGCGAAGCAGGATCTCTGGAACTGCTGCTGGAGGCCAAAGTACTGGGGGCATTCCCATGCAAATGTTAGAGGCACCAGAACATGCCATAGGAATAGAATGGGAGAATACTAGCAGTTCTTCTATATCATTGGATTTGAAAACATCTTTAAGCCATTTTCCTCCATTTCGTTTTGGGTGA 2139 0.4502 MDPQYPKPRSYAPQMEMAIPPSQLSDNDRSSSELRALDCNLTSLCDHIQMEGFNSGSFSDVVLHAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAITMALAYLYGHHPKLSDSNAFRVLAAASFLDLQDLCAICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRNACWGYLCQSGGMELKEVLPKLSSQTLHALLTSDELWIPSEEIRFELALHTFLAKIAHWKAEHPEQGSSGSESATNTHSDSDNIKGKSGVDSCTSNRLGTVGRLNIKSDVKETVDHSLRVEVADDVAHFNNEDSDSHQLSQATSFAGSSNLEPRYACNMEGPSSISNLFREKDGTRTSCSYVEMPLTAGASGAAIEGSSEEGSNFSCNGPTSSDWGRYSVPLFPWGGRVVGVRRLKDHSKGKYGIHGDEHEAFVNIFEGGSLLYCNMSFESLLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKSCCLVSAACTCRQPFAFSQGVTTPSYYMQEHNQNNNSGNMGNIYVAESSQSQGSGIFRPVRIHVRGAIDGLAGIGRGTTYVPTSASPPTRFVFSRVPFGVGNRNYPQSAANDDSETQADHNVDMSGDGLTALVGLSQGGSSGTNAHGEMTQRGYETGMRSRISGTAAGGQSTGGIPMQMLEAPEHAIGIEWENTSSSSISLDLKTSLSHFPPFRFG 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1317 712 Gene3D Potassium Channel Kv1.1; Chain A 25 193 IPR011333 -
Lele20g1317 712 SUPERFAMILY POZ domain 53 157 IPR011333 -
Lele20g1317 712 ProSiteProfiles BTB domain profile. 59 129 IPR000210 GO:0005515
Lele20g1317 712 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 13 712 - -
Lele20g1317 712 Pfam BTB/POZ domain 53 157 IPR000210 GO:0005515
Lele20g1317 712 MobiDBLite consensus disorder prediction 247 275 - -
Lele20g1317 712 MobiDBLite consensus disorder prediction 250 275 - -
Lele20g1317 712 MobiDBLite consensus disorder prediction 1 31 - -
Lele20g1317 712 SMART BTB_4 59 159 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1317 Lele-ChrLele20 17701717 17705514 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lele20g1317 BTB 2.9e-15 CL0033