Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1311 ATGGATTACATATTTCAGGTTTGTTCGCCCCATCTGTATTCTATCTTGAGTCAGGTTCCTAGATCTTTAACGAAGAATTCTTTATACACTCCAAAACAAAAGATGCAGAACGAGGAGGGACAGATTACTGAGCTTTACATTCCAAGGAAATGCTCCGCAACAAATAGACTGATAACTGCAAAGGACCATGCCTCCATCCAGATTAACATTGGGCATCTGGACGAGAACGGTATCTTCAATGGTCATTCCTCCACATTTGCTATGTGTGGTTTCATTCGTGCCCAGGGAGATGCTGACAGTGCCTTAGATCGTCTGTGGCAGAAGAAGAAAGTCGAAGCCAAGCAACAGTAG 351 0.4359 MDYIFQVCSPHLYSILSQVPRSLTKNSLYTPKQKMQNEEGQITELYIPRKCSATNRLITAKDHASIQINIGHLDENGIFNGHSSTFAMCGFIRAQGDADSALDRLWQKKKVEAKQQ 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1311 116 Pfam Ribosomal protein S21e 35 111 IPR001931 GO:0003735|GO:0005840|GO:0006412
Lele20g1311 116 ProSitePatterns Ribosomal protein S21e signature. 45 53 IPR018279 GO:0003735|GO:0005840|GO:0006412
Lele20g1311 116 Gene3D - 31 116 IPR038579 -
Lele20g1311 116 FunFam 40S ribosomal protein S21 35 115 - -
Lele20g1311 116 PANTHER 40S RIBOSOMAL PROTEIN S21 35 114 IPR001931 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1311 Lele-ChrLele20 17679035 17681808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1311 35 115 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 81.481 2.42e-50 152