Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1309 ATGGATGGCAAGGATAACAGGTATGTATGTTGCTGCATTCTGATTTCGTCGTCTCTCTCGGTTCCGTGTGCCTTGTGGAGGATCTACTGGTACGGTCTCGTGATATGGATCACTCTCTCTGAAGCTTTGGTTCTGACTTCCAAGAGGGAGGAATTGTGGCAAAGAAGTCCATTGAGGATATCAAGCATGCTTAGTCCTGAAGGAGAACTTAAAATTAGTTTTGGCTATCAATGCAATAGACAAAGAAGTATACCTTGTGAGGTTTCCAAAGGCTGTAAAATTCTACCTGAAGTTCACCGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCAGCCTTGAGCGCAAATGCTACTTTAGCCAACACAAACATCTGCAATGGTTTGATAGGAGAAGAATTACTTCCAACTTGGGACTCACCTAATTCATTCCGTAAGGTACCCTCTTCTCCAAGTCTTTCAAGGTTGGATATATTATCATCTTCTCTCCACAGTAATTTGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGTGACACGCTTGATTATGACTCTTGTACATTAAAATCCATGAGTGCTCCTTCCAGGAGTGAAGGTTTTCTTAATGCCATGGAAGTCCAAGCGGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTCTTATGTGCGGTTTATGATGGCTTTAATGGTAGAGATGCCGCCGACTTTCTGGCCGGTACTCTGTATGACACCATTGTATCTAACTTTAATACGTTGTATTGGGAATTCGAGCTAGATTCCATCAAAACTTCTTATGATGTGGGTTTGGGTGGTTCCTATAAGTTGGATGATGGTCTCATTGTTCATGAGGAGCAATCTCTGTCAAAACTCAAGGGAAACAACAATTCTTATCTTGGCTGTTTGCCAAAGAAGTTAGGAGCGCCTTATAAATCATTTTCAGATGGTGTGCTTGATAGCCTTGAACGCTCTCTTAGTCAGGTGGAGAATGATTTCCTGTATATGGTTGAGCAGGAAAAGGAGGAACGGCCTGATTTAGTTTCTGTTGGATCTTGTGTTTTACTCGTGCTTCTTCATGGGAATGACTTATACACACTTAATTTAGGTGACAGCAAAGCTGTATTAGCAACATGTAATACGAGAGGCAAGCTTCAAGCTATCCAGCTCACAGAAAGTCATACGGTTGAAAATGACGTTGAAAGAGCTCGACTTCTGGCTGATCACCCCGATGATCCTAAACCCATCATAGGAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTAGGAGTAGGTTACTTGAAAAAGAAATGTCTGAATGATGCACTGATGGGAATCCTTGGAGTCCAAGATCTTATAAGCCCTCCATATGTTTCCTCTCAACCATCACTGAATGTGCACAAGATCTCAAACTCTGATCAATTTGTGATAGTAGGAAGTGACGGCTTATTTGACTTCTTCAGTAATGATGAGGCTGTGGAGTTTGTTGAGTCTTATATCTTAAGCAATCCATTTGGCGATCCAGCTAAGTTTCTTATAGAGCAGCTTGTAGCAAGAGCAGCCAAGTCCGCAGGTTTCAGCATGGAAGAGTTGATGAATGTTCCGGCTGGGAGGAGGAGGAGGTATCATGATGACGTAACCGTGATTGTCATCATTCTTGGGATGAATCATCGGACTTCAAAGGCATCAATTTCCATCTAA 1722 0.4251 MDGKDNRYVCCCILISSSLSVPCALWRIYWYGLVIWITLSEALVLTSKREELWQRSPLRISSMLSPEGELKISFGYQCNRQRSIPCEVSKGCKILPEVHRTSSFSCLSGAALSANATLANTNICNGLIGEELLPTWDSPNSFRKVPSSPSLSRLDILSSSLHSNLSNLSCSPSTPSDTLDYDSCTLKSMSAPSRSEGFLNAMEVQAAGGAAGEDRVQAVCSEENGWLLCAVYDGFNGRDAADFLAGTLYDTIVSNFNTLYWEFELDSIKTSYDVGLGGSYKLDDGLIVHEEQSLSKLKGNNNSYLGCLPKKLGAPYKSFSDGVLDSLERSLSQVENDFLYMVEQEKEERPDLVSVGSCVLLVLLHGNDLYTLNLGDSKAVLATCNTRGKLQAIQLTESHTVENDVERARLLADHPDDPKPIIGGKVKGKLKVTRALGVGYLKKKCLNDALMGILGVQDLISPPYVSSQPSLNVHKISNSDQFVIVGSDGLFDFFSNDEAVEFVESYILSNPFGDPAKFLIEQLVARAAKSAGFSMEELMNVPAGRRRRYHDDVTVIVIILGMNHRTSKASISI 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1309 573 Gene3D - 178 569 IPR036457 -
Lele20g1309 573 SUPERFAMILY PP2C-like 211 560 IPR036457 -
Lele20g1309 573 ProSiteProfiles PPM-type phosphatase domain profile. 198 560 IPR001932 -
Lele20g1309 573 SMART PP2C_4 189 558 IPR001932 -
Lele20g1309 573 CDD PP2Cc 211 560 IPR001932 -
Lele20g1309 573 Pfam Protein phosphatase 2C 335 525 IPR001932 -
Lele20g1309 573 PANTHER PROTEIN PHOSPHATASE 2C 187 558 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1309 Lele-ChrLele20 17669863 17674309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1309 66 570 PP2C-type Phosphatase Gene Family AT3G16560 63.424 0.0 593