Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1301 ATGGAGAACGTGGGAGGAGGTTCGTCTTCGAATAATGACAACAGCGGAATCAAGGAGCAAGACAGGTTGTTGCCGATAGCGAATGTTGGTCGGATCATGAAGCAGATACTGCCTCAGAACGCTAAGATATCCAAGGAGGCGAAGGAGACCATGCAGGAATGCGTGTCGGAGTTCATAAGCTTCGTGACCAGCGAGGCGTCGGAGAAGTGCCGGAAGGAGAGAAGGAAGACGGTGAATGGGGATGACTTATGCTGGGCCTTGGCCACGCTTGGTTTTGAAGACTATGCCGAGCCAATGAGGAGGTATCTCCACAGATTTAGAGAGTTGGAGGTTGACAGAGCTAATCATGACAGAGGAAATAGCCCTCACGACAGGGACGACCTCTATCAAATTCCCTCCTCAGGAATCAGGCACTGA 417 0.5132 MENVGGGSSSNNDNSGIKEQDRLLPIANVGRIMKQILPQNAKISKEAKETMQECVSEFISFVTSEASEKCRKERRKTVNGDDLCWALATLGFEDYAEPMRRYLHRFRELEVDRANHDRGNSPHDRDDLYQIPSSGIRH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1301 138 FunFam Nuclear transcription factor Y subunit B-3 12 133 - -
Lele20g1301 138 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Lele20g1301 138 Gene3D Histone, subunit A 10 131 IPR009072 GO:0046982
Lele20g1301 138 PRINTS CCAAT-binding transcription factor subunit A signature 70 88 - -
Lele20g1301 138 PRINTS CCAAT-binding transcription factor subunit A signature 89 107 - -
Lele20g1301 138 PRINTS CCAAT-binding transcription factor subunit A signature 51 69 - -
Lele20g1301 138 SUPERFAMILY Histone-fold 20 124 IPR009072 GO:0046982
Lele20g1301 138 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 10 114 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lele20g1301 138 ProSitePatterns NF-YB/HAP3 subunit signature. 54 70 IPR003956 GO:0005634|GO:0006355|GO:0043565
Lele20g1301 138 MobiDBLite consensus disorder prediction 115 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1301 Lele-ChrLele20 17628061 17628477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1301 17 127 CCAAT-HAP3 Transcription Factor Family AT2G47810 71.171 9.78e-58 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lele20g1301 CBFD_NFYB_HMF 1.3e-27 CL0012