Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1289 ATGGGACTTTCCAACTTCCCCAGCGCGGCCGAGGGTCTGCTTCCGGTGCTGGTCATGAACACCGTCGTATCGGTGGCTCTGTTGAAGAACGTGTTCAGGTCACTTCTGCAAGTGGTTGGTGCGTCTTGGAAGCCAGACATGGTCCATGATGATGAGCAGAGCTGTGTAACGAGGAGGAGGGTGTCCATTAGGCAGTACAAGTGTATGATGAGTGAGAGTGGTGGAACAAGGTCGGCCAAGGCGGAGTGCTGCGTGTGTCTGTGTGGTTTCCGAGGAAGTGAAGAGGTGAGTGAGTTGTCTTGCAAGCATTTCTTCCACAGAGCTTGCTTGGACAAGTGGTTCCTCAACAGACACCCTACCTGCCCTCTCTGTCGCTCCACTTCTTAG 387 0.5401 MGLSNFPSAAEGLLPVLVMNTVVSVALLKNVFRSLLQVVGASWKPDMVHDDEQSCVTRRRVSIRQYKCMMSESGGTRSAKAECCVCLCGFRGSEEVSELSCKHFFHRACLDKWFLNRHPTCPLCRSTS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1289 128 ProSiteProfiles Zinc finger RING-type profile. 83 125 IPR001841 -
Lele20g1289 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 128 IPR013083 -
Lele20g1289 128 SMART ring_2 83 124 IPR001841 -
Lele20g1289 128 SUPERFAMILY RING/U-box 82 127 - -
Lele20g1289 128 Pfam Ring finger domain 82 125 IPR001841 -
Lele20g1289 128 PANTHER - 1 127 IPR044249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1289 Lele-ChrLele20 17559874 17560260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1289 1 126 C3H Transcription Factor Family AT2G04240 32.215 3.47e-19 76.6