Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1274 ATGGAATGGTATGATATAATCAGAGATATTGGGTTCGGCAACTTTGGGGTGGCAAAGCTGGTTCGGGATAAACGGAGTTGTGACTTTTTTGCTATCAAGTTCATTGAGCGAGGCTTAAAGATTGATGAGCATGTGCAAAGGGAAATCATAAACCATAGGTCCTTGAAGCATCCCAATATCATTCGATTCAAAGAGGTGTTGCTCACTCCGACACATCTTGCCATAGTGATGGAATATGCCTCTGGAGGAGAACTCTTTGAAAGAATATGCAATGCTGGCAGATTCAGTGAAGATGAGGCAAGGTATTTCTTTCAGCAGTTGATTTCTGGCGTCAGCTATTGCCATTCAATGGAAATTTGCCACAGAGATCTTAAGCTAGAAAACACACTCTTAGATGGAAGCACAGCGCCACGACTCAAACCCAAATCTACTGTAGGAACCCCTGCTTATATTGCACCAGAGGTTTTGTCACGAAGGGAATATGATGGGAAGGTTGCAGATGTTTGGTCTTGTGGTGTGACCTTATATGTCATGCTGGTTGGTGCTTATCCTTTTGAAGATCATGAAGATCCTAAAAACTTCAGAAAAACACTTCAGCGAATTCTCAGCGTCCACTATTCTGTACCAGACTATGTTCGTATCTCAAAAGAGTGTAAACACCTTCTGTCTAGAATATTTGTGGCCGACCCAGAGAAGGTATACTTAAGAATTACGATCCCAGAAATCAAAATGCACCCGTGGTTCCTGAAGAACTTGCCACTAGAATTCATGGACGAAGGGAGACAAAGTGGGATACAAGAAGATTTAGTGAATGATAGGCAGAGCATCGAAGAAATAACGAGTATAATTCAAGACGCTCGAAAAGCAGGGGATCAATGCCCAAAAGTTGGTGGGCAGTTCGTTGGGATTGGAAGTATGGATCTTGATGAGCTGGATACTGATGCTGACATTGATGATTTAGAGGCAATCGGCGATTTTGTGTGTGCTTTGTGA 993 0.426 MEWYDIIRDIGFGNFGVAKLVRDKRSCDFFAIKFIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLLTPTHLAIVMEYASGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSTAPRLKPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDHEDPKNFRKTLQRILSVHYSVPDYVRISKECKHLLSRIFVADPEKVYLRITIPEIKMHPWFLKNLPLEFMDEGRQSGIQEDLVNDRQSIEEITSIIQDARKAGDQCPKVGGQFVGIGSMDLDELDTDADIDDLEAIGDFVCAL 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1274 330 SUPERFAMILY Protein kinase-like (PK-like) 2 255 IPR011009 -
Lele20g1274 330 FunFam Serine/threonine-protein kinase SRK2A 80 256 - -
Lele20g1274 330 Pfam Protein kinase domain 4 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1274 330 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele20g1274 330 ProSiteProfiles Protein kinase domain profile. 4 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1274 330 PANTHER SERINE/THREONINE KINASE 4 267 - -
Lele20g1274 330 SMART serkin_6 4 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1274 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele20g1274 330 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele20g1274 330 Gene3D Transferase(Phosphotransferase) domain 1 80 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1274 Lele-ChrLele20 17472409 17475010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1274 4 258 CBL-interacting serine-threonine protein kinases AT4G24400 39.781 3.15e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele20g1274 Pkinase 7.4e-58 CL0016