Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1256 ATGGTGTATGTGGATGACCGCAATCCAAGACCAGAGTCATCTGAGGGTCGTAGGCCCACGGATCTCGTTGGCATCGGCCTCTATAAATCAGGGAAGGGTCACCAAGAAATTGCAAAGAGTGGAGCTACCAAAATGGCGGCAACTATAGGTACGTATAATAATAGCGGCAGCCTGGCATCGGATTTCTTAGATCCGTGTAGTGAAGATCTGATAAAGGCGCTCGAACCTTTTATGAAAATGGATTCATCGACGTCTTCTTTGTCTTCTATCTCTCTTCCATCTTCACCTTCCTGCTCTTATACTCCACCCACTTCTATGTCCGGTTATTATCCCAACCTCCGAACAGCACCGAACTCACACGTATTTTCTTCGGGGTTCTCGAGTAGCATAGGGCTTAACCAACTCACCCCATCTCAAATTCTTCAGATTCAGGCTCAATTCCAGCTTCGACAGCAACAATCCCTCGACCTCCTCCGCCCTAAGCCTGTCCCCATGAAACATGTCCGGAATGCGCCGAAACCCACGAAACTATACAGAGGAGTGAGGCAGAGGCATTGGGGGAAATGGGTGGCTGAGATCAGACTCCCAAAGAACCGAACCCGTCTCTGGCTTGGCACTTTTGACACTGCCGAAGAGGCTGCCTTGGCTTATGACAAGGCCGCTTATAAGCTCAGGGGCGACTTTGCTCGCCTTAACTTCCCTCATCTGCGTCATCAAGGAGCTCACGTGTTTGGCAAATTTGGGAATTACAAACCTCTACCTTCCTCCGTCGATGCCAAGCTTCAAGCTATTTGTGAAAGTTTGTCCACCTCCCAGAAACAGGGGAGTGCAGAGGAGTCTTGCTCCGTCAGCGAGTCAAAGCCTAAGGTGGTGCCGTCGGAGGAGTCAGAATCGAAAAGTGATGTGGAGGATTGTAAGGTGGAGAACACAGCATCGTCGCCCTTGTCTGATGAATCCTGGGCTGGCTCGTCTTCCCCTGAATCCGACATCACTTTCTTGGATTTCTCGGATTCCAGGGATGAAACCATAGACTTCGGGCTGGAGAAGTTTCCTTCCGTGGAGATTGATTGGTCTGCTATTTGA 1083 0.5005 MVYVDDRNPRPESSEGRRPTDLVGIGLYKSGKGHQEIAKSGATKMAATIGTYNNSGSLASDFLDPCSEDLIKALEPFMKMDSSTSSLSSISLPSSPSCSYTPPTSMSGYYPNLRTAPNSHVFSSGFSSSIGLNQLTPSQILQIQAQFQLRQQQSLDLLRPKPVPMKHVRNAPKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPHLRHQGAHVFGKFGNYKPLPSSVDAKLQAICESLSTSQKQGSAEESCSVSESKPKVVPSEESESKSDVEDCKVENTASSPLSDESWAGSSSPESDITFLDFSDSRDETIDFGLEKFPSVEIDWSAI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1256 360 Gene3D AP2/ERF domain 177 235 IPR036955 GO:0003700|GO:0006355
Lele20g1256 360 SMART rav1_2 177 240 IPR001471 GO:0003700|GO:0006355
Lele20g1256 360 FunFam Ethylene-responsive transcription factor 2 176 235 - -
Lele20g1256 360 MobiDBLite consensus disorder prediction 290 306 - -
Lele20g1256 360 MobiDBLite consensus disorder prediction 275 289 - -
Lele20g1256 360 MobiDBLite consensus disorder prediction 1 22 - -
Lele20g1256 360 CDD AP2 176 236 IPR001471 GO:0003700|GO:0006355
Lele20g1256 360 Pfam AP2 domain 178 226 IPR001471 GO:0003700|GO:0006355
Lele20g1256 360 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 55 360 - -
Lele20g1256 360 MobiDBLite consensus disorder prediction 1 17 - -
Lele20g1256 360 PRINTS Ethylene responsive element binding protein signature 200 216 IPR001471 GO:0003700|GO:0006355
Lele20g1256 360 PRINTS Ethylene responsive element binding protein signature 178 189 IPR001471 GO:0003700|GO:0006355
Lele20g1256 360 MobiDBLite consensus disorder prediction 307 332 - -
Lele20g1256 360 SUPERFAMILY DNA-binding domain 177 235 IPR016177 GO:0003677
Lele20g1256 360 MobiDBLite consensus disorder prediction 275 332 - -
Lele20g1256 360 ProSiteProfiles AP2/ERF domain profile. 177 234 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1256 Lele-ChrLele20 17370310 17371905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1256 64 360 AP2-EREBP Transcription Factor Family AT4G39780 53.177 1.07e-83 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele20g1256 AP2 8.3e-15 CL0081