Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1236 ATGAATTCGACATCCACACAGTTTGTTTCCACAAGAAGGATGGGTGTATATGATCCTATCCACCAGATTAGCATGTGGGAAGAAAACTTCAAAAGTAATTGTAATTTAAGTGCATCTGTGCCCTTAATTGGTGAGCCAGATGTGAAGTTGGATAATCAGTCAGAGGATTCTTCTCATGGAATGCTTGGAGTTCCAAAGAATTATGACCAAGAAGCTAGCAAGTCTATTGAAAAGATACAGAGACGCCTTGCACAAAATCGAGAGGCTGCTCGTAAGAGTCGTCTGCGGAAAAAGGCTTATGTTCAGCAATTAGAGTCAAGTCGCATGAAGCTGATCAAGTTAGAGCAAGAGCTGGACCGTGCAAGACAGCAGGGATCTTTTATAGGTTGTGGATTGGATACTGATAATTTGGCATTTGCTGGTCCTGTAAATTCAGGCATTGCAACCTTTGAGATGGAGTATGGGCACTGGGTAGAAAAACAAAATAAACAAATTTGTGAGCTGAGAACCGCTTTAAATGCTCATATCAGCGACATAGAGCTCAGAATACTTGTAGATGGGATAATGAATCACTATTCTGACCTTTTCCGTCTGAAATCAGCAGCCGCAAAAGTCGATGTTTTCTATGTTTTGTTTGGAATGTGGAAAACAACAGCTGAACGGTTTTTCTTGTGGATTGGAGGATTCCGCCCATCCGAGCTTCTCAAGGTTCTTGTCCCTTTGATCGAACCTTTGACAGAACAACAACGAATGGATGTTTATAACCTTGGACAATCATGCCAGCAAGCAGAAGATGCCCTTTCACAAGGCAGGGACAGACTTCAGCAAATACTTGTTGAAACTGTCGCCGCCGGACAACTGGTCGACGGAACCTACATTCCTCAGATGGCTACTGCGGTGGAGAAGTTGGAAGCTTTGGTGAGCTTTGTGAACCAGGCCGATCATCTTCGGCAGGAAACTCTGCAACAAATGTTTCGAATCCTTACAATTCGTCAAGCAGCTCGGTGCTTGCTTGCTCTAGGGGAATACTTCCAACGCTTGCGGGCTTTGAGCTCTCTTTGGGCAAATCGTCCTTCTGAACCACCTGCTTAG 1092 0.4423 MNSTSTQFVSTRRMGVYDPIHQISMWEENFKSNCNLSASVPLIGEPDVKLDNQSEDSSHGMLGVPKNYDQEASKSIEKIQRRLAQNREAARKSRLRKKAYVQQLESSRMKLIKLEQELDRARQQGSFIGCGLDTDNLAFAGPVNSGIATFEMEYGHWVEKQNKQICELRTALNAHISDIELRILVDGIMNHYSDLFRLKSAAAKVDVFYVLFGMWKTTAERFFLWIGGFRPSELLKVLVPLIEPLTEQQRMDVYNLGQSCQQAEDALSQGRDRLQQILVETVAAGQLVDGTYIPQMATAVEKLEALVSFVNQADHLRQETLQQMFRILTIRQAARCLLALGEYFQRLRALSSLWANRPSEPPA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1236 363 Pfam Seed dormancy control 164 239 IPR025422 GO:0006351|GO:0043565
Lele20g1236 363 SMART brlzneu 74 145 IPR004827 GO:0003700|GO:0006355
Lele20g1236 363 Coils Coil 97 124 - -
Lele20g1236 363 Pfam bZIP transcription factor 78 113 IPR004827 GO:0003700|GO:0006355
Lele20g1236 363 Gene3D - 76 126 - -
Lele20g1236 363 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Lele20g1236 363 FunFam BZIP family transcription factor 77 126 - -
Lele20g1236 363 SUPERFAMILY Leucine zipper domain 78 116 IPR046347 GO:0003700|GO:0006355
Lele20g1236 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Lele20g1236 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 118 IPR004827 GO:0003700|GO:0006355
Lele20g1236 363 PANTHER TRANSCRIPTION FACTOR TGA9 1 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1236 Lele-ChrLele20 17273271 17275395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1236 1 361 Calmodulin-binding Proteins AT5G10030 69.697 0.0 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele20g1236 DOG1 9.5e-31 No_clan