Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1217 ATGGACTACTATTTTGGAAACCCTAATCATTCACAATTCTATGCAGCAAATCCGTCCTCGTCTGATCAGTTCATTTCGGATTATTTGGTGCTTGATAATCGTGTTGGGCATCAAGAATCCTGGTCACACAGCACAGAATCATCGAAGAAGGCAACTAGCGATGCCAGTGGATTTAGTGCTGCTACTGATGCTATCTCAAAATGCAAAAACGAGATGAAACGAAACAAGCTGGGGGAGAGGAGTCGAAGGATCGCGTTCAGAACCAGATCGGAGCTTGAGGTTATGGATGATGGGTATAAATGGAGGAAGTACGGAAAGAAGTCGGTGAAGAACAGTCCGAATCCAAGGAACTACTACAAGTGTTCGTATGGAGGATGCAGTGTGAAGAAGAGGGTGGACAGGGACAGGAATGATTCGAGCTACGTGATAACAAGTTATGAAGGAGTTCACAACCACGAGATCCCAAGTGCTACCTACTTCTCCTCCTTCGTTCATCCTAATCCTTGGCCCTTTCACTCTTCTGCTAATCCCTCATCTTCCTAG 543 0.4549 MDYYFGNPNHSQFYAANPSSSDQFISDYLVLDNRVGHQESWSHSTESSKKATSDASGFSAATDAISKCKNEMKRNKLGERSRRIAFRTRSELEVMDDGYKWRKYGKKSVKNSPNPRNYYKCSYGGCSVKKRVDRDRNDSSYVITSYEGVHNHEIPSATYFSSFVHPNPWPFHSSANPSSS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1217 180 FunFam WRKY transcription factor 57 81 155 - -
Lele20g1217 180 ProSiteProfiles WRKY domain profile. 90 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g1217 180 SMART WRKY_cls 95 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g1217 180 Pfam WRKY DNA -binding domain 96 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele20g1217 180 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 160 IPR044810 GO:0003700
Lele20g1217 180 Gene3D WRKY domain 82 148 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele20g1217 180 SUPERFAMILY WRKY DNA-binding domain 87 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1217 Lele-ChrLele20 17188114 17189549 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1217 44 173 WRKY Transcription Factor Family AT5G64810 52.899 3.40e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele20g1217 WRKY 2e-22 CL0274