Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1213 ATGAAACCTCCCTCTCCCTCCTACTATCATCGCTCTTTCTTCCTCTTATTCTCCCTGACTCTTCTCTCCCTCCAGCCTCCTCCCTCTTCCTCTGCTTCTTCATCATCTTTTATAGACCAAACCCAAAAGCTTCTCACCTTCAAGAACTCCCTCCCCGACCCCTCCTTACTCCAAAGCTGGCTCCCTAATCACAATCCCTGTTCCTTCTTTCGGGTTTCCTGCCAGGATACCCTCGTTTCTTCCATAGACCTCAGCCAAGTCCCCTTGAACACTAATTTCAGCGTCGTCTCTACCTCTCTACTCACCCTCGACCACCTGCAAGTTCTTATTCTGCAAGGCACCAATCTTTCTGGCACCATTTCTCTCTCGGCTGGCTTCAGGTGTAGCAGCTCATTGAGCTCCTTAGATCTATCTCAGAACACTTTGTCTGGTTCCGTTTCGTCCCTGAACTATTTGTCCTCCTGTTCGTCACTGAAATCTCTCAACCTTTCAGCTAATCTCCTGGAATTTTCAGGGAGAGATTCAACCGGTTTGAGGCTCAGTCTCCAGGTCCTCGATCTCTCTTACAACAATAAGATTTCGGGTCCCAACGTTCTCCCATGGATCTTATCACTGGGCTGCGACGGCATGAAGCTCTTGTCTCTGAAGGGCAACAAAATCACAGGGGAAATGAGCTTTTCGACTTGCAAAGCTTTGCAGCATCTCGACCTTTCCTCTAACAATTTCTCTCTCGCTGTTCCTTCTTTTGGGGAGTGCCTGGCTTTAGAGTACCTCGACATCTCTGCAAATAAGTTTTACGGTGACATTGGTCACGCCCTCTCCGTTTGCAAGCAGCTCAGCTACTTGAACATCTCAAGCAACGAGTTCTCCGGTCCTGTTCCCTCACTTCCATCCGGTTCTCTACAGTACTTGTATCTGGCCCACAACCATTTCCAGGGGCAGATTCCTGCTGCCCTTTCTGACTTGTGCACCACCCTGGTAGTATTCGATCTTTCCTCAAACAACCTGTCCGGCGTGCTTCCAAGCGATTTCACGGCTTGTTCTTCATTAGAATCTTTTGATATATCCTACAACAAGTTCACCGGCGAACTTCCGATTGACTTTTTCGCAGAATTGATTGGCTTGAAGAGGTTAGTTCTTTCCTCTAATGGCTTCACCGGTACCCTGCCTCATACTCTGTCTCAGTTCTCGAAGTTGGAGTCGTTGGATCTGAGTTCTAATAACCTCACTGGCTCAATTCCTGGAGGGCTCTGTGAAGATCCGAGGAACAATCTGAAAGAATTATACCTGCAGAATAATCTGTTGACGGGTTCTATTCCATCCACACTCAGCAACTGTTCTCAGCTTGTGGCTTTGGACTTGAGTTTCAACTACTTGATGGGGACCATCCCTTCCAGCTTTGGGTCCCTTTCAAAACTCAAAGATTTGATTCTTTGGCTTAACCAACTCCATGGAGAAATACCCCAAGAGCTTAAGCACATTAAGACTCTAGAGAATTTGATTCTGGACTTCAATGAGCTGTCTGGGACCATTCCTTCTGGCCTAAGCAACTGTACCAACATGAATTGGTTGTCCTTGTCTAATAACAGGTTGAGTGGGGAGATTCCGGCATGGATTGGTCAGCTTTCAAATCTTGCGATCTTGAAATTGAATAATAACTCCTTCTCTGGGAAGATTCCGCCGGAGCTTGGGAATTGTCAAAGATTGATATGGTTGGATCTGAATACTAATTATCTGAATGGATCCATTCCTCCTGAGTTGTTTAAGCAGTCGGGCAAAATTGAAGTTAATTTCATCAGTCGAAAGACATATGTGTACATAAAGACTGACGGCAGTAAGCAGTGCCATGGAGCAGGAAATTTGCTAGAGTTTGCTGGTATTCCTATGGAGAAGATGAGCAGAATTTCGGCCAGGAGTCCTTGCAATTTCACTAGCTTCACTAGAGTTTATAATGGTAAGGTCCGTCCCAAGTTCAACAGTGGTTCTATGATTTTTTTGGACATTTCACATAATATGTTGTCGGGTACTCTTCCGAAGGAGATGGGGAGTATGAACACGTTGTTTATTTTGAACTTGGGATACAACAATATATCTGGGAACATCCCACTGGAATTTGGAGACATGAAAAATCTCAACATTCTTGATCTCTCCAACAATAGGCTTGAAGGACAGATTCCTCAATCCTTGACAGGCATTTCCATGCTCACGGAAATTGATTTGTCAGACAACTATCTCTCAGGATTGATTCCTGAATCTGGTCAATTTGATACCTTTCCAGCTGCAAAATTTGCAAATAATTCTGGCCTCTGTGGTGTCCCTCTTGCCTCATGTGGATCAGACTCGAGATCAAATGCAGATGCCCGGCATCAAAGGTCTGACCAGAGACGGGCATCTCTGGCAAGGAATGTGTCCATTGGATTGCTGTTCGCCCTCTTTTGCATCCTTGGTCTGATTATAATCGCCTTCGAGGCAAGAAAGAGGAGGAAGAAGAAGGAGGCTACCCTGGATGTCTACATTGACAGCCGGTCTCACTCAGGTACGGCTAATGCTGGTTGGAAGGTGAGTGCCCGTGAAGCTCTTAGCATAAATCTTGCAACTTTCGAGAAGCCCCTTCGGAAGCTTACTTTTGCGGATCTTCTTGAAGCCACAAATGGCTTCCACAATGATAGTCTTATTGGTAAAGGTGGTTTTGGAGATGTATACAAGGCTCAGTTGAAAGATGGAAGCGTAGTGGCGATTAAGAAACTGATTCATATCAGCGGGCAAGGGGACAGGGAGTTCACTGCTGAAATGGAAACCATCGGGAAAATTAAGCATCGGAACCTTGTTCCCCTTCTCGGTTACTGCAAAGTTGGAGAAGAAAGACTCTTGGTTTACGAGTACATGAAATATGGAAGCCTGGAGGATGTTTTGCATGATCAGAGGAAAGCCGGGATAAAGCTGAACTGGGCAGCAAGGAGGAAGATTGCAATTGGAGCCGCTAGGGGATTGGCTTTTCTTCACCACAATTGCATTCCTCATATCATTCACAGAGACATGAAATCGAGCAATGTATTGCTTGATGGGAATCTGGAAGCCAGAGTCTCGGATTTTGGAATGGCTAGGCTTATGAGTGCCATGGATACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCTGGCTATGTTCCTCCTGAATACTACCAGAGCTTTAGATGCTCTACTAAAGGTGATGTTTATAGTTACGGTGTAGTTTTATTGGAGCTATTGACAGGGAAACGACCTACGGATTCATCGGACTTCGGTGATAATAACCTTGTGGGATGGGTTAAACAGCATGCTAAATTAAAAATAAGTGATGTTTTTGACCCAGAGCTCATGAAAGAGGATTCGAGTCTTGAGATTGAGCTTTTACAACACTTAAGAGTTGCTTGTGCTTGTCTTGATGATCGACCTCTGCGGCGTCCCACAATGATTCAAGTGATGGCAATGTTCAAGGAAATCCAAGCAGGATCTGGGATGGATTCCCAGTCAACCATCACGAGTGAGGATGGTGGTTTTGGCGCCATGGAAATCGTAGACATGAGCATTAAAGAAATCCCTGAATTAAGCAGCAAGCAGTAG 3603 0.4549 MKPPSPSYYHRSFFLLFSLTLLSLQPPPSSSASSSSFIDQTQKLLTFKNSLPDPSLLQSWLPNHNPCSFFRVSCQDTLVSSIDLSQVPLNTNFSVVSTSLLTLDHLQVLILQGTNLSGTISLSAGFRCSSSLSSLDLSQNTLSGSVSSLNYLSSCSSLKSLNLSANLLEFSGRDSTGLRLSLQVLDLSYNNKISGPNVLPWILSLGCDGMKLLSLKGNKITGEMSFSTCKALQHLDLSSNNFSLAVPSFGECLALEYLDISANKFYGDIGHALSVCKQLSYLNISSNEFSGPVPSLPSGSLQYLYLAHNHFQGQIPAALSDLCTTLVVFDLSSNNLSGVLPSDFTACSSLESFDISYNKFTGELPIDFFAELIGLKRLVLSSNGFTGTLPHTLSQFSKLESLDLSSNNLTGSIPGGLCEDPRNNLKELYLQNNLLTGSIPSTLSNCSQLVALDLSFNYLMGTIPSSFGSLSKLKDLILWLNQLHGEIPQELKHIKTLENLILDFNELSGTIPSGLSNCTNMNWLSLSNNRLSGEIPAWIGQLSNLAILKLNNNSFSGKIPPELGNCQRLIWLDLNTNYLNGSIPPELFKQSGKIEVNFISRKTYVYIKTDGSKQCHGAGNLLEFAGIPMEKMSRISARSPCNFTSFTRVYNGKVRPKFNSGSMIFLDISHNMLSGTLPKEMGSMNTLFILNLGYNNISGNIPLEFGDMKNLNILDLSNNRLEGQIPQSLTGISMLTEIDLSDNYLSGLIPESGQFDTFPAAKFANNSGLCGVPLASCGSDSRSNADARHQRSDQRRASLARNVSIGLLFALFCILGLIIIAFEARKRRKKKEATLDVYIDSRSHSGTANAGWKVSAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGKGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDQRKAGIKLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDGNLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTDSSDFGDNNLVGWVKQHAKLKISDVFDPELMKEDSSLEIELLQHLRVACACLDDRPLRRPTMIQVMAMFKEIQAGSGMDSQSTITSEDGGFGAMEIVDMSIKEIPELSSKQ 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1213 1200 SUPERFAMILY Protein kinase-like (PK-like) 872 1163 IPR011009 -
Lele20g1213 1200 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 659 777 - -
Lele20g1213 1200 SUPERFAMILY L domain-like 54 366 - -
Lele20g1213 1200 ProSiteProfiles Leucine-rich repeat profile. 131 153 IPR001611 GO:0005515
Lele20g1213 1200 Pfam Protein kinase domain 886 1156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1213 1200 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 420 511 - -
Lele20g1213 1200 PRINTS Leucine-rich repeat signature 708 721 - -
Lele20g1213 1200 PRINTS Leucine-rich repeat signature 399 412 - -
Lele20g1213 1200 SMART serkin_6 886 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1213 1200 ProSiteProfiles Protein kinase domain profile. 886 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1213 1200 SMART LRR_typ_2 732 755 IPR003591 -
Lele20g1213 1200 SMART LRR_typ_2 424 446 IPR003591 -
Lele20g1213 1200 SMART LRR_typ_2 542 566 IPR003591 -
Lele20g1213 1200 SMART LRR_typ_2 372 395 IPR003591 -
Lele20g1213 1200 SMART LRR_typ_2 396 420 IPR003591 -
Lele20g1213 1200 SMART LRR_typ_2 708 731 IPR003591 -
Lele20g1213 1200 Pfam Leucine rich repeat N-terminal domain 39 74 IPR013210 -
Lele20g1213 1200 SUPERFAMILY L domain-like 300 764 - -
Lele20g1213 1200 ProSiteProfiles Leucine-rich repeat profile. 398 420 IPR001611 GO:0005515
Lele20g1213 1200 Gene3D Phosphorylase Kinase; domain 1 847 961 - -
Lele20g1213 1200 Pfam Leucine Rich Repeat 424 446 IPR001611 GO:0005515
Lele20g1213 1200 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 300 1157 - -
Lele20g1213 1200 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1008 1020 IPR008271 GO:0004672|GO:0006468
Lele20g1213 1200 FunFam serine/threonine-protein kinase BRI1-like 2 848 961 - -
Lele20g1213 1200 Gene3D Ribonuclease Inhibitor 44 777 IPR032675 -
Lele20g1213 1200 ProSitePatterns Protein kinases ATP-binding region signature. 892 915 IPR017441 GO:0005524
Lele20g1213 1200 FunFam Brassinosteroid LRR receptor kinase 962 1163 - -
Lele20g1213 1200 Gene3D - 597 660 - -
Lele20g1213 1200 FunFam Calmodulin-binding receptor kinase CaMRLK 299 415 - -
Lele20g1213 1200 CDD STKc_IRAK 892 1161 - -
Lele20g1213 1200 FunFam Leucine-rich repeat receptor protein kinase EMS1 512 602 - -
Lele20g1213 1200 Pfam Leucine rich repeat 364 409 IPR001611 GO:0005515
Lele20g1213 1200 Pfam Leucine rich repeat 300 360 IPR001611 GO:0005515
Lele20g1213 1200 Pfam Leucine rich repeat 705 745 IPR001611 GO:0005515
Lele20g1213 1200 Gene3D Transferase(Phosphotransferase) domain 1 962 1163 - -
Lele20g1213 1200 Pfam Brassinosteroid receptor island domain 592 659 IPR045381 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1213 Lele-ChrLele20 17157062 17160664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1213 31 1195 Receptor kinase-like Gene Family AT4G39400 68.054 0.0 1529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lele20g1213 Pkinase 3.2e-45 CL0016