Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1199 ATGGATTTGGACGATTTCCGATCCATATTGGAGACTGCGGGCGTTGACGTGTGGACTTTTATCGACACCGCAATCACCGTCGCTTCCTTGGATTACGGCAATGACTTGAAGCATCGCAGGGATGGAATCGTCGAGCGCCTCTACGCGGCTACTCCCGCTCCTGCGTCCTGTCGGAATTGCGAAACCAATCATATCCGGTCTAACGGCTGCGGAATAGGCGCTCCAATCAAGAAGCAAAACAGTCCTCTCCCCGACAAAAGTCGTGCCTCGCCGGCAACGCCGCAATCCCTGGTTAAAGATGACAACGAAGACGACGAGGAGATAGATCCTTACGGGGGTTTGTTCGATGATGAGCCGAAGAAGATTCTGGAGATTAAAGAGCTACTTGAAGACCCTAACCAGTCTGAAGAATCATTGGTGGACTTGCTACAAAATCTCGCGGACATGGATATCACATTCCAAGCGCTGAAGGAAACTGACATTGGGAGGCACGTTAATCGTTTGCGAAAGCATTCGTCCAATGATGTTCGTAGATTGGTGAAGCTCCTTGTCAGGAAATGGAAAGATATTGTCGATGAATGGGTGAAGCTGAATCCACCAGCAGAGCACGCCTCGCTTATGGATGCAGACTCGCCTCAGCCAAAAACCACTCCACAAAACGTCTATCATCAGATTCCTGATTTTGCTTACTCGCCAAATCCACATAATGGGAGTTCTGGGTCCGACCGGAACAATTCAGAGGCAGAACTAAAACCAAAACCAATTCCTCGGAAAGAAGCCCCACCTAAACCGGCGCCATCTGTCTCTATATCTACTTCTGCTCCGCCTCAAAACAGACAGAGAGAACAGAGGGAAAGCAGTTTTGACGCGGAGAGACTTGCTTCGGCAAGAAGGCGGCTTCAAGAAAACTACAAGGAAGCGGAAAATGCCAAAAAGCAAAGAACCATACAGGTGATGGACATCCATGACCTACCAAAACCAAAAGCCAAGAATGCCTTCTTTGCGAAGAACAAAGGCGGCGGCGGTTCCCAGGGAAGGCACTGGTGA 1047 0.4967 MDLDDFRSILETAGVDVWTFIDTAITVASLDYGNDLKHRRDGIVERLYAATPAPASCRNCETNHIRSNGCGIGAPIKKQNSPLPDKSRASPATPQSLVKDDNEDDEEIDPYGGLFDDEPKKILEIKELLEDPNQSEESLVDLLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKLLVRKWKDIVDEWVKLNPPAEHASLMDADSPQPKTTPQNVYHQIPDFAYSPNPHNGSSGSDRNNSEAELKPKPIPRKEAPPKPAPSVSISTSAPPQNRQREQRESSFDAERLASARRRLQENYKEAENAKKQRTIQVMDIHDLPKPKAKNAFFAKNKGGGGSQGRHW 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1199 348 MobiDBLite consensus disorder prediction 71 116 - -
Lele20g1199 348 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 348 IPR044790 -
Lele20g1199 348 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 116 204 IPR035441 -
Lele20g1199 348 Coils Coil 290 317 - -
Lele20g1199 348 Pfam TFIIS helical bundle-like domain 142 191 IPR017923 -
Lele20g1199 348 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 120 201 IPR035441 -
Lele20g1199 348 MobiDBLite consensus disorder prediction 266 281 - -
Lele20g1199 348 MobiDBLite consensus disorder prediction 225 245 - -
Lele20g1199 348 ProSiteProfiles TFIIS N-terminal domain profile. 120 194 IPR017923 -
Lele20g1199 348 MobiDBLite consensus disorder prediction 225 314 - -
Lele20g1199 348 CDD TFIIS_I 120 192 - -
Lele20g1199 348 MobiDBLite consensus disorder prediction 282 314 - -
Lele20g1199 348 SMART TFS2_5 122 193 IPR003617 GO:0005634
Lele20g1199 348 MobiDBLite consensus disorder prediction 83 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1199 Lele-ChrLele20 17079062 17081105 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele20g1199 Med26 2.4e-12 No_clan