Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1195 ATGCTGGAAAACTCCACTTTATCGGAAAATGCCGCAGCTCCCGTCCAGAACCTCCCCACAGAGGACGGAGGTGGTCGTGGGCCTGACACCCATGGCCTCAGAGAGCAGCGGGGGCTCGCCGACCAGGAAGTTGACCGGAATTCCGTCGGTCAGCGGTGGCCTCGAGAAGAGACATCGGCTTTGCTCAAAATAAGGTCTGAGATGGACATTGCTTTCAGGGATATAAGCCCCAAAGGTCCTCTTTGGCAACAGGTTTCGAGGAGATTGGCGGAGCTAGGATACCATAGAAGTGCGAATAAATGTAAGGAGAAGTTTCAAAACATTCACAAGTACCACAGAAGGACCAAGGAAGGCCGTTATGGCGGACCCAGCCGCAAGACCTATCGTTTCTTTGAGCAGCTTGAAGCTCTCCTTCCGCCTCCAACTTCAACGGAAAAGGATACCCCACTGGATGTTGTTCAGCATGCTGTGCCCTGCTCTATTCGATTCCCTAGTGCAAATAGTAATTCCATCACTTCTTCTTCGGATGAAGAATCTGGGGAAGCTGCACCCAGAAAGAAGAGTAAGCTAATTAAGTTTTTCCAGGGCTTGATGAAGGAAGTAATAGAGAAGCAAGAGACTCTACAAAAGAATTTTATGGAGCTGTTGGAAAAATGTGAGCAAGATCGAATAGCTAGAGAGGAAGCATGGAGGACGCAGGAATTCGATCGGCTTAACAGGGAGCGTGAGCTTTTTGCTCGAGAAAGATCTGCTGCTGCAGCCAAGGATGCTGCCTTGCTTGCCTTTCTGAAGAAGATGACAGAACAATCAGCATGGCCGGTGCAGCTGCCGGAGAATATTATTCCGGTTGATCGGAACCTGATTCCAGACAATATAGATAAGAACAAACAAGAAAAAGTCAATGGAGGTTGTGCTGTTAGCGTTACGGATAAACGAGAATGTGGAAATATTGGGAATTTCATACAGATGAGCTCCTCCCGTTGGCCTAAAGAAGAAGTGGAAGCTCTGATCAGATTGAGGACAGACATGGAGGTGGAATGTGAAGGAAATAATGGGCCTAATAAGGGACCCCTATGGGAAGAAATATCTTCGGCAATGAAAAAGCTCGGGTACGATCGCAGTGCAAAGAGATGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAAGAGGATTAAGCAGAAAAACAAGAGAAAGCCCGAGGATTCCAAGACATGCCCCTATTTTCACCAACTAGATGAGCTATATAGCAAGAAACGAAGGAAGGTCCAAGAATCAGCTGCTGCTTCTGAGAACGAGTTGAATGCGGAGGAGCTGTTAATGCATATTATGAGCGGTCAAGAAGAGCGACAATTATCTGAAGATGCTGACAGGGAGAAGACTGACCAGATTGAAGGAGATAAGGAAGATTTGGATCAGATGGTAGACAATAATACTTCAACAGCAATCATGGGTTGA 1458 0.4671 MLENSTLSENAAAPVQNLPTEDGGGRGPDTHGLREQRGLADQEVDRNSVGQRWPREETSALLKIRSEMDIAFRDISPKGPLWQQVSRRLAELGYHRSANKCKEKFQNIHKYHRRTKEGRYGGPSRKTYRFFEQLEALLPPPTSTEKDTPLDVVQHAVPCSIRFPSANSNSITSSSDEESGEAAPRKKSKLIKFFQGLMKEVIEKQETLQKNFMELLEKCEQDRIAREEAWRTQEFDRLNRERELFARERSAAAAKDAALLAFLKKMTEQSAWPVQLPENIIPVDRNLIPDNIDKNKQEKVNGGCAVSVTDKRECGNIGNFIQMSSSRWPKEEVEALIRLRTDMEVECEGNNGPNKGPLWEEISSAMKKLGYDRSAKRCKEKWENINKYFKRIKQKNKRKPEDSKTCPYFHQLDELYSKKRRKVQESAAASENELNAEELLMHIMSGQEERQLSEDADREKTDQIEGDKEDLDQMVDNNTSTAIMG 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1195 485 SUPERFAMILY Homeodomain-like 325 405 IPR009057 -
Lele20g1195 485 ProSiteProfiles Myb-like domain profile. 326 386 IPR001005 -
Lele20g1195 485 SMART sant 324 388 IPR001005 -
Lele20g1195 485 SMART sant 49 111 IPR001005 -
Lele20g1195 485 Coils Coil 198 218 - -
Lele20g1195 485 MobiDBLite consensus disorder prediction 1 52 - -
Lele20g1195 485 MobiDBLite consensus disorder prediction 1 15 - -
Lele20g1195 485 MobiDBLite consensus disorder prediction 27 52 - -
Lele20g1195 485 MobiDBLite consensus disorder prediction 448 474 - -
Lele20g1195 485 CDD GT1 326 393 - -
Lele20g1195 485 PANTHER FI21293P1 34 465 - -
Lele20g1195 485 CDD GT1 52 116 - -
Lele20g1195 485 ProSiteProfiles Myb-like domain profile. 52 109 IPR001005 -
Lele20g1195 485 MobiDBLite consensus disorder prediction 444 485 - -
Lele20g1195 485 FunFam Trihelix transcription factor GT-2 328 391 - -
Lele20g1195 485 Pfam Myb/SANT-like DNA-binding domain 51 137 IPR044822 -
Lele20g1195 485 Pfam Myb/SANT-like DNA-binding domain 326 415 IPR044822 -
Lele20g1195 485 FunFam Trihelix transcription factor GT-2 53 114 - -
Lele20g1195 485 Gene3D - 328 391 - -
Lele20g1195 485 Gene3D - 53 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1195 Lele-ChrLele20 17048006 17049779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1195 45 421 Trihelix Transcription Factor Family AT1G76880 42.539 8.08e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele20g1195 Myb_DNA-bind_4 7.2e-22 CL0123