Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1192 ATGAGTGGGATGGATTATGAGTTAGTTGATCACTACTTCTGTCCCTCCCACATGTATCAACTCCATGAATATACCTTAGAAAATGCATTTCCATTCCAAACAGAATATTATATCTTATCTCCAAATACCTCCAAAGATGCAATGCTCGACCAAGAGTTTATTGAAGGATTACTGCAGCAGCCACATGCAGAGCTTCTGGACTTTGATTTCATGGATCCTGATGTCTCCGTGGGGATGGAGACAGAATTGAGCCAAGAAGTTACTACTCCGAGATGTCAGGAAAATGGCGATCCTTGTTTAATGGGAATTCAAGCGGCACTAATGGAAGATGGCAGTTTAACTGATCTCTTGCTGACAGGAGCTGAAGCTGTTGAAGCACAGAACTGGGCTCTAGCCTCAGACATCATTAAGAAGATTAACGATGACTTGTGTGTAAAAAATGGAGATAGTTTATTGAACAGGTTGGCTCTTTTCTTCACTCAAGGTCTGCATTATAAAACCATAAATGCTCCTGCAGTGAACTATGAACCTGTTTCTACCCAGACAAACACCTTCTTCACCTTTCATATCCTCCAGGAGGTCTCTCCCTATGTGAAATTTGCTCATTTCACAGCCAACCAAGCGATCTTTGAAGCTACTGAAGGTGATAGAGAGATCCATGTCATTGATTTTGACATCATGGAGGGAATCCAGTGGCCGCCTTTGATGGTTGACCTGGCAATGAGGAAAAACACTACCCTTAGAGTAACAGCCATCACGTTGGACCATCAAAATGCCGCCATCGTCCAACAAACGGGAAGAAGGTTACAAGAGTTTGCTGCCTCTATCAATTTCTCTTTCACGTTCGATCAAATAATGATTACTGGGGAAGAAGATTTTCGAAGAATCATATTGGGTCCTACGCTTGTAGTCAATTGTATGATACACCAGTGGATGCCCAACAGGAGTTTCTCGCTGATAAAAACTTTTCTGGATGGAGTAAGCAAATTATCACCTAAGTTTGTTATTTTAGTAGAAGATGAACTATTCAATTTTTCTAGGCTCAAATCTATGTCCTTTGTGGAGTTCTTCTATGAGGCTTTGCTCCATTATACAGCAATTTCTGATTCACTTGCAAGTAGTTTCTGGGATGACCACAAGATGAAGTTGATCGAACAGGAAGTTATGGGGATGAGGATTACAGACAGTGTGAGGCAGTTTCCATGTGAAAGGGAGAAGAGAACTTTGTGGGAAGAAGGATTGAATTACTTGAAAGGGTTTAAACGAGTTCCTGTTAGTAGCTGCAATATTTCTCAAGCCAAGTTCTTGGTGAGCCTCTTCGGTGAGGGTTATTGGGTGCAATATGACAGGCGTAGATTGTCTGTGTGTTGGAAGTCCAGGCCTTTAACAGCGGCTTCAATTTGGGTACCGACAAGAAATTATCAAGCTCAAATGTCTGCATGGGTAGTTCGCAGTGTTGTCTACGACCTTATAATTCTGGCCAGAGAGATAATAAGTTGCCTTCCTTTAGCCTTTCTGTTCCCAAATTTTTGCTTGTCGCAACTTTACTGGGAAGATGGATGTGTATACCTGGTCCTGGAGTTTTGTGCTGGAGGAAACTTGGCTTCTTACATTCAGCGCCATGGGAGAGTTCAACAACAAATTGCTAGAAAATTCATGCAGCATCTTGGTTCTGCTTTAAAAATATTGCACTATCGTGGTTACAGTGAATGTGCGTCTGAGACTAGAAACAAATTTGCTTGCTTTGGGCCATTGTTGGACCAGAACATTTTGTTATCGAGCCTAGGGGATGATGATTCAGTGCTTAAGATTGCTGATTTTGGTTTATCAAGAACATTGCGTCAGGTTGAATATGCCGAGACCGTTTGTGGGTCTCCATTATTCATGGCCCCTGAAGTTCTTCAATTCCAGAAATATGATAATAAGCTGTTGAAGAATATCAGATCCTGCACATGTCTTCCGTTTTCTCAGCGAGTCCTTTCAGCCTTAGACCCTTACTGTCTTGATATGTGTTCTAGACCACTAGGATGCCATCTGAAGGCGGCGAAGACAGCTTACCGGAATGCCAAGGCTGAGGGGAATCGGCGGGACGAGGCGCGGTGGGCGAACGTGATCGGAGATTTCTTGAAGAACAGAGGAGAATACGTTGAGGCCGTCAAATGGCTTCGTGTAGATTATGATATTTCCCTCAAATGTCTGATTGTGACTTGCAAGATTTGTCAATTTGTGAATGATTGCCCGGCACTATTTGCTCGACTGGAAGTGCTGAACATTTCTGGGAATCGTCTTACTGATGCATGTGGGTCTTCCCTTTCGACAGTCTTTAGCAAAATGTACAGTAGAAACTTTTACTTCCACTTACAGGAGTTCTGCTTTGTTACTTTTGTAGCTCTCTGTAGCTTGAATGTGGAGAACTGTCTTATCACAACCAGAACTACCCAAAAGATTGCTGATGCATTGGACTCTAACACTGTACTTGCTCAGTTTTGTATCGGTATCCTGAATCTAAAATGATACAACAGTCCTGTAGCTGGAAATGCTATTGTTAATCTCCTCGCCAAGCTTTCTACGACGAAAAGGTTTTCTGAGCTGAACTTAAGTGGTCTAAGACTAGGCAAACCTGTTGTTAATTCCCTGTGTAAGCTTGCTTGGAATACCAATTTGTCAGGACTGATGCTCGGACGCACTGGCGTTGGAACTCTCATATCCAATCCTGTTTTAAACACCAGTTTTAATTTATTCTGTTCCGTGCTTGAGCTTAATCTGGAAGGAAATCATATTACGCCCGAGAGAACAACTACCTGGAGGAGTTTAATCTTGCCGGTAATGCCGTTCCAAATGAACTTCACACTCTACAACTCGACTTCTCAGCTGAAGGACTCACCAATTGTAGAGAATCGTAAGGAGGATTTACCCATGATAGGGGATGATTGTGAAGAGCCCCTTTGTGTTCTTAACACTGACTATCTTCAGCTTGGAGTTGCCGACAGTGAAGATGATCCCGTGGCTAGAGTCGGTGCTTCTGGAATGGATGACAGTTGTGCTGATTCGCATCAAAGAAATTCTTCCTCCCCTGAGTGCAAATTCATTCAACAACTTTCAACTGCTATTGCTATGGCAAAGCACTTGCAATTACTTGACATCAGCGATAATGGTTTCTCCACTGAAGTTGCAGAAACATTATATAGTTCTTGGTCATCCACATTACGTGCCGTTTCAAGTCAGAAGCACATCACCGAGCACATTATTCATTTCTCAACGAAGGAAAATGGGTGCTGCAGAGTGAAACCATGCTGCAAGAAGTATTGA 3309 0.4261 MSGMDYELVDHYFCPSHMYQLHEYTLENAFPFQTEYYILSPNTSKDAMLDQEFIEGLLQQPHAELLDFDFMDPDVSVGMETELSQEVTTPRCQENGDPCLMGIQAALMEDGSLTDLLLTGAEAVEAQNWALASDIIKKINDDLCVKNGDSLLNRLALFFTQGLHYKTINAPAVNYEPVSTQTNTFFTFHILQEVSPYVKFAHFTANQAIFEATEGDREIHVIDFDIMEGIQWPPLMVDLAMRKNTTLRVTAITLDHQNAAIVQQTGRRLQEFAASINFSFTFDQIMITGEEDFRRIILGPTLVVNCMIHQWMPNRSFSLIKTFLDGVSKLSPKFVILVEDELFNFSRLKSMSFVEFFYEALLHYTAISDSLASSFWDDHKMKLIEQEVMGMRITDSVRQFPCEREKRTLWEEGLNYLKGFKRVPVSSCNISQAKFLVSLFGEGYWVQYDRRRLSVCWKSRPLTAASIWVPTRNYQAQMSAWVVRSVVYDLIILAREIISCLPLAFLFPNFCLSQLYWEDGCVYLVLEFCAGGNLASYIQRHGRVQQQIARKFMQHLGSALKILHYRGYSECASETRNKFACFGPLLDQNILLSSLGDDDSVLKIADFGLSRTLRQVEYAETVCGSPLFMAPEVLQFQKYDNKLLKNIRSCTCLPFSQRVLSALDPYCLDMCSRPLGCHLKAAKTAYRNAKAEGNRRDEARWANVIGDFLKNRGEYVEAVKWLRVDYDISLKCLIVTCKICQFVNDCPALFARLEVLNISGNRLTDACGSSLSTVFSKMYSRNFYFHLQEFCFVTFVALCSLNVENCLITTRTTQKIADALDSNTVLAQFCIGILNLKXYNSPVAGNAIVNLLAKLSTTKRFSELNLSGLRLGKPVVNSLCKLAWNTNLSGLMLGRTGVGTLISNPVLNTSFNLFCSVLELNLEGNHITPERTTTWRSLILPVMPFQMNFTLYNSTSQLKDSPIVENRKEDLPMIGDDCEEPLCVLNTDYLQLGVADSEDDPVARVGASGMDDSCADSHQRNSSSPECKFIQQLSTAIAMAKHLQLLDISDNGFSTEVAETLYSSWSSTLRAVSSQKHITEHIIHFSTKENGCCRVKPCCKKY 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1192 1102 SMART serkin_6 434 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1192 1102 ProSiteProfiles GRAS family profile. 104 469 IPR005202 -
Lele20g1192 1102 Gene3D Ribonuclease Inhibitor 727 1084 IPR032675 -
Lele20g1192 1102 Pfam Protein kinase domain 516 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1192 1102 ProSiteProfiles Protein kinase domain profile. 434 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1192 1102 PANTHER PROTEIN TONSOKU 678 733 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Lele20g1192 1102 Pfam GRAS domain family 114 468 IPR005202 -
Lele20g1192 1102 Gene3D Transferase(Phosphotransferase) domain 1 509 643 - -
Lele20g1192 1102 SUPERFAMILY RNI-like 737 1064 - -
Lele20g1192 1102 SUPERFAMILY Protein kinase-like (PK-like) 515 642 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1192 Lele-ChrLele20 17015968 17028160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1192 104 468 GRAS Transcription Factor Family AT5G41920 30.829 3.20e-40 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Lele20g1192 GRAS 1e-72 CL0063
TF GRAS Lele20g1192 GRAS 1e-72 CL0063