Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1182 ATGACCTACTCTGCTTTTTCTGTCATCTTCCTTCTCATACCCGTTGTGTCCTCCGTCTCAGGTGACTCCCCATCTATCCAAAGTGCCTGCCTTGCCACCCGCTTCTCCGACCAATGCCTTGCTTCTCTGACCGGACCCATTAACGACCTCCCTCCCGACCCCACCTCGCGTCAGATCATCCAATCCGCCGACAACCTCAAGACCGCTCAATCTAAGATCAAGTCCCTCCTCGACTCCTCGCGTGATGGTGACTATCTCAACCGCACCATCCTACTTGATTCTGAGTGTCGCATTTCCCTCGTCAACGACGCCCTCCCGGCCGGCAAGACCAAGGACTCGCCCGTTTGGATGAGCGCTGCATTTGCCTACCAGTTCGACTGCTGGTCCGGGTTGAGAAAAGAGTGTTACCAGTCGGTGCAGGAAGCTGTTGACGCCTCTCCGGATAACAGTGAGGCGAGGTTTGTGATAAATATAAGTAAAGGGGTTTACGAGGAAACTGTTAGGATTCCGCTAAGGAAGACCATCATCACTGGATCTGCACATGTTGGTCAGCCTGGAATGACCACCTACAATTCTGCTACCGTCGGGGTTCTTGGGGATGGATTCATGGCGAATAATCTGACGATCCAAAACACGGCAGGACCCGATGCTTACCAAGCAGTAGCCTTCAGATCAGACAGCGACCTCTCTGTTCTGGAAAACATCGAATTCATGGGGAATCAAAACACTTTATATGCTCATTCCGTTCGTCAATTCTACAAATCATGTCGCATCCGAGGCAACGTAGACATGATCTTCGGCAAAGCGGTCGCGTTTTTCCAGGAGTGCGCTATCCTATTGAGTCCAAGACAGAGTGACCCGGAAACAGGGGAGACCAATGCGGTGACGGCGCATAGGAGAACAGACCCAGCGCAATCCACAGGCTTTGTATTTCATAAGTGCGCGGTGACTGGGACCAAGGAGTACATGGAAAAGTACAGGAAGAAGCCAGAGGTGCACAAGAACTTCTTGGGTAGGCCATGGAAATTATATTCAAGAACGGTGTTCATTCACTCTGTGTTGGAAGCTATCATCTCGCCGGAGGGATGTATGGCCTGGGACTGTGATTTGGGTCTGGACACACTTTACTACGGGGAGAGTAACAATGCTGGTCCCGGTTCTGATCGGAGTCGGAGAGTGGCCTGGAGTAGTGAAATTCCCCGCCAAAATGTTCGATCGACAACTTCATTCAAGGCAGTGATTGGATTCCATCCGATCACCTAG 1263 0.5146 MTYSAFSVIFLLIPVVSSVSGDSPSIQSACLATRFSDQCLASLTGPINDLPPDPTSRQIIQSADNLKTAQSKIKSLLDSSRDGDYLNRTILLDSECRISLVNDALPAGKTKDSPVWMSAAFAYQFDCWSGLRKECYQSVQEAVDASPDNSEARFVINISKGVYEETVRIPLRKTIITGSAHVGQPGMTTYNSATVGVLGDGFMANNLTIQNTAGPDAYQAVAFRSDSDLSVLENIEFMGNQNTLYAHSVRQFYKSCRIRGNVDMIFGKAVAFFQECAILLSPRQSDPETGETNAVTAHRRTDPAQSTGFVFHKCAVTGTKEYMEKYRKKPEVHKNFLGRPWKLYSRTVFIHSVLEAIISPEGCMAWDCDLGLDTLYYGESNNAGPGSDRSRRVAWSSEIPRQNVRSTTSFKAVIGFHPIT 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1182 420 SUPERFAMILY Pectin lyase-like 136 397 IPR011050 -
Lele20g1182 420 PANTHER PECTINESTERASE 9 397 - -
Lele20g1182 420 Pfam Pectinesterase 135 409 IPR000070 GO:0030599|GO:0042545
Lele20g1182 420 Gene3D - 130 416 IPR012334 -
Lele20g1182 420 Pfam Plant invertase/pectin methylesterase inhibitor 25 145 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1182 Lele-ChrLele20 16968545 16970543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1182 136 405 Carbohydrate Esterase AT5G09760 62.898 4.99e-129 382