Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1180 ATGGATATCAACCAAAACCCTACCATGTTCACAAGCGTTAACAACACCACTTGGAATCTGGACAATATGGAAATGGACCATCACAGCAATCTCCATCATCATCAAATCCATATGTGTTCTTCTTGGCCTAACTACCCTAATTACCCTCATCAGATAATACCATCTTCTTCGGCGTCCACCACAATTATACCCTCTTCAGGGTTTCTAAACAACGTCGAGTTGGAGGAAGATGAAGAAAGAGGAGGAGGAGGAGGAGGAGAAGAAGAGCTGGGAGCAGTGAAAGAGATGATGTACAAGATCGCTGCTATGCAGCCGGTGGACATAGACCCAGCCACCATACGAAAGCCAAAGAGGCGAAACGTCAGAATCAGCGACGATCCACAAAGCGTCGCCGCGAGACACAGGAGAGAGAGGATCAGCGAGAAAATCCGAATCCTCCAAAGACTCGTCCCTGGTGGCACCAAGATGGACACTGCCTCCATGCTCGACGAAGCCATTCGCTATGTCAAGTTCTTGAAGCGACAAATCAGGTTGCTCCAATCTCAACCCTCACCCTCACAACCACCACAATGCATCACTAACACTACTCTTGCCAATATTGGGGTTAACAACACTGCTACTTCTAATATTCATAGCGATTACTGGCCTTTTGCACCACCGTCTTTACTACACTGTCCCACCACCACCACCTCCTCCTCCTCCGCCGCCGCCGCCGCCATGGGCATGCCTGTCAGACTGGGACTTGGCTCCGGCTATAGCCATGAGTCATGA 771 0.4981 MDINQNPTMFTSVNNTTWNLDNMEMDHHSNLHHHQIHMCSSWPNYPNYPHQIIPSSSASTTIIPSSGFLNNVELEEDEERGGGGGGEEELGAVKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSQPSPSQPPQCITNTTLANIGVNNTATSNIHSDYWPFAPPSLLHCPTTTTSSSSAAAAAMGMPVRLGLGSGYSHES 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1180 256 CDD bHLH_AtIND_like 124 179 - -
Lele20g1180 256 FunFam BHLH transcription factor 126 188 - -
Lele20g1180 256 Pfam Helix-loop-helix DNA-binding domain 133 172 IPR011598 GO:0046983
Lele20g1180 256 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 185 IPR036638 GO:0046983
Lele20g1180 256 Coils Coil 162 182 - -
Lele20g1180 256 SMART finulus 129 178 IPR011598 GO:0046983
Lele20g1180 256 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 14 212 IPR045843 GO:0003700|GO:0006355
Lele20g1180 256 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 123 172 IPR011598 GO:0046983
Lele20g1180 256 Gene3D - 126 187 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1180 Lele-ChrLele20 16949502 16950272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1180 90 189 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 87.000 2.33e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele20g1180 HLH 1.2e-06 No_clan