Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1137 ATGTCTCCTCCAGCTTGTAAGTTTCTTCCTGTGACTCTCTTATCTTCTCACAAAGGTGAATATTCCTCGGAGATCAAACGGGCTTATATTCCTCTAAATCGAATGATCAGGTGGCTGCTGGTATTCTTGGCCATCTTAGGACTCAGCTGGGCAACTACTGGTCCTGATGTGGAAGGTGAAGCTTTGTTAGATTTTTTGAAGGTTCTCAATGATTCCAACCAGCCGATGACAGATTGGAATAGTTTTCTTGTAAGCCCTTGCTTTAGTTGGTCTCATGTCACATGCAGAGATGGACATGTCATATCTCTGAGCTTGGGTTCGAAAGGATTTTCTGGAACACTGTCTCCTTCAATTACCAAATTGAAGTACTTGATTACCTTGGAATTGCAGAACAATAGCCTTTCAGGTTTCTTACCTGATTATATTGCCAACTTGACACGTCTGCAATATCTAAATCTTGCTGACAATAATTTCCATGGTTCTATACCATCTGCATGGGGTCAAATTTCCTCTCTGAGGACTCTGTTATTGAGAGGGAATGGCTTGTCTGGATCCATACCCATTTCTGTGGAAAATCTCAGTGGGTTATCAGAATTGGATCTTTCTTCTAATCATTTAACTGGAACCATCCCAAAGCACCTCTTTTCAGTTCCAATCTTCAACTTTTCAGATACGGACCTTCATTGTGGCTCTAGCTTGGATCAACCTTGTGTTTCTAATTCAGCTATTCCAGCTTCAACCGCCAAATCAAAACTTGCAGTGGCTTTAAGTTTGGCGAGTTGTGGCGCCTTCGGAATTCTGTGTCTCGGGGTCATCTTTACCTATGCATACCATTACATTCAAGGACACAAAAATGATGTTTTTGTTGATGTTTCAGGTGAAGATGAGAGCAAGATCTCATTTGGGCAACTGAGGAGATTTTCTTTGCGTGAACTTCATCTAGCTACAAAAAATTTCAGTGAAAGCAACGTGATTGGCCAAGGAGGCTTTGGAAAAGTATACAAAGGAGTACTCTCAGACAATACAAAGATTGCAGTAAAACGCCTTGCCGATTATCATAATCCTGGTGGAGAAGCTGCATTCCAAAGAGAAGTTCAACTCATAAGCGTTGCAGTTCATAGAAATCTCCTTCGTTTGATTGGTTTCTGTACAACCTCAACCGAAAGAATCCTCATATACCCTTTCATGGAGAATCTAAGTGTTGCATATCGTTTGAGAGATTTGAAACCTGAAGAGAAGGGTCTGGATTGGCCAACAAGGAAACGTATAGCATTTGGTACAGCACGTGGATTGGAGTATTTGCACGAGCAATGTAATCCTAAGATCATACATCGTGATTTAAAGGCAGCAAACATCTTATTAGATGATGAATTTGAAGCAGTTCTGGGAGATTTTGGGCTAGCTAAGCTGGTTGACACAAGACTAACTAGTGTTACCACTCAAGTGAGGGGCACAATGGGACATATAGCCCCAGAATACTTGTCCACAGGAAAATCATCAGAGAAAACAGATGTTTTTGGATATGGCATAACACTTCTTGAAATTGTCACAGGTCAACGAGCAATCGACTTCTCCCGGCTGGAAGAAGAGGAGGATGTTCTTCTGCTAGATCACATTAAGAAGCTGCTGAGAGAGAAGAGGATAAAGGACATAGTGGACAAGAATTTGGACAGATATGATGCAAAGGAAGTGGAGAGGATTATTCAGGTGGCTTTGCTTTGCACGCAAGGCTCGCCGGAGGATCGACCGAGCATGTCAGAGGTGGTGAATTTGCTGAATGGGGAAGGTTTGGCAGAGAGATGGGGTGAGTGGGAGCTAATGGAAGAGATGAACGATAGAGAAATGTCACTCTTGTCTCACCAATTTGCCTGGGCTGATGAATCTACGCACGATCAAGAGGCTATTCAGCTTTCATGGGCAAGATAG 1926 0.4247 MSPPACKFLPVTLLSSHKGEYSSEIKRAYIPLNRMIRWLLVFLAILGLSWATTGPDVEGEALLDFLKVLNDSNQPMTDWNSFLVSPCFSWSHVTCRDGHVISLSLGSKGFSGTLSPSITKLKYLITLELQNNSLSGFLPDYIANLTRLQYLNLADNNFHGSIPSAWGQISSLRTLLLRGNGLSGSIPISVENLSGLSELDLSSNHLTGTIPKHLFSVPIFNFSDTDLHCGSSLDQPCVSNSAIPASTAKSKLAVALSLASCGAFGILCLGVIFTYAYHYIQGHKNDVFVDVSGEDESKISFGQLRRFSLRELHLATKNFSESNVIGQGGFGKVYKGVLSDNTKIAVKRLADYHNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTSTERILIYPFMENLSVAYRLRDLKPEEKGLDWPTRKRIAFGTARGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRLTSVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEIVTGQRAIDFSRLEEEEDVLLLDHIKKLLREKRIKDIVDKNLDRYDAKEVERIIQVALLCTQGSPEDRPSMSEVVNLLNGEGLAERWGEWELMEEMNDREMSLLSHQFAWADESTHDQEAIQLSWAR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1137 641 Pfam Leucine rich repeat N-terminal domain 57 95 IPR013210 -
Lele20g1137 641 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Lele20g1137 641 Pfam Protein kinase domain 320 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1137 641 SUPERFAMILY L domain-like 58 220 - -
Lele20g1137 641 Gene3D Ribonuclease Inhibitor 55 239 IPR032675 -
Lele20g1137 641 SUPERFAMILY Protein kinase-like (PK-like) 297 592 IPR011009 -
Lele20g1137 641 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 39 602 - -
Lele20g1137 641 FunFam Leucine-rich repeat receptor-like protein kinase 55 212 - -
Lele20g1137 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Lele20g1137 641 Gene3D Phosphorylase Kinase; domain 1 288 395 - -
Lele20g1137 641 FunFam Somatic embryogenesis receptor kinase 1 288 395 - -
Lele20g1137 641 ProSiteProfiles Protein kinase domain profile. 319 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1137 641 Gene3D Transferase(Phosphotransferase) domain 1 396 611 - -
Lele20g1137 641 SMART serkin_6 319 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1137 641 FunFam Somatic embryogenesis receptor-like kinase 1 396 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1137 Lele-ChrLele20 16696595 16699841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1137 38 641 Receptor kinase-like Gene Family AT5G10290 58.456 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele20g1137 Pkinase 1.6e-44 CL0016