Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1128 ATGGATAAGTACGAGGAGGTGAAGGATTTGGGAGCTGGCAATTTTGGGGTGGCTAGGCTCATGAGGAACAAGGAGACCAAGGAACTCGTCGCCATGAAATATATCGAGCGTGGTCGCAAGATTGATGAGAACGTAGCCAGAGAGATTATGAACCACAGGTCCCTTCGACACCCCAATATAATTCGATTCAAGGAGGTCATTTTAACCACCACGCATTTAGCAATAGTAATGGAGTATGCTGCTGGAGGGGAACTATTTGAGAGGATATGCAATGCTGGCAGATTCAGTGAAGACGAGGCTAGATATTTCTTTCAGCAGCTGATATCTGGTGTTAATTTCTGTCACACCATGCAAATATGTCACAGAGATTTGAAGCTTGAAAATACCCTTTTGGATGGAAGTCCTGCACCTCGCTTGAAAATTTGCGATTTTGGTTATTCCAAGTCATCTTTGCTGCATTCAAGACCCAAGTCTACGGTTGGAACTCCAGCTTATATAGCACCTGAAGTTCTTTCAAGGCGCGAATATGATGGCAAGTTGGCGGATGTGTGGTCATGTGGAGTGACTCTTTATGTGATGCTTGTTGGAGCATATCCCTTTGAGGACCAGGATGATCCAAGGAATTTCCGTAAAACAATCCAGCGAATAATGGCTGTTCAATACAAAATCCCAGATTATGTTCACGTATCTCAAGATTGCAGGCACCTCCTCTCTCGCATTTTTGTGGCTAATCCATTGAGGAGAATAACAATAAAGGACATCAAGATCCACCCATGGTTTCTGAAGAACATACCGAGGGAACTAACTGAATCCGCGCAGGCGGTGTATTACCAGAGAGACAATCCAAACTTTCAGGGTCAGAGTGTCGAGGAAATAATGAGGATTGTGGGAGAGGCAAGAACGCCACCACCAGTATCGAGGCCGGTCAAAGGGTTTGGGTGGGAAGGTGAAGAAGAAGAGGAAGAGGAAGAAGAAGGAGTAGAAGAAGAGGCGGAGGAGGAGGAAGATGAAGAAGATGAGTATGACAAGAGGGTGAAGGAAGTTCATGCAAGCGGAGAATTTCAAGTCAGTTGA 1074 0.4525 MDKYEEVKDLGAGNFGVARLMRNKETKELVAMKYIERGRKIDENVAREIMNHRSLRHPNIIRFKEVILTTTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPRNFRKTIQRIMAVQYKIPDYVHVSQDCRHLLSRIFVANPLRRITIKDIKIHPWFLKNIPRELTESAQAVYYQRDNPNFQGQSVEEIMRIVGEARTPPPVSRPVKGFGWEGEEEEEEEEEGVEEEAEEEEDEEDEYDKRVKEVHASGEFQVS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1128 357 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lele20g1128 357 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1128 357 PANTHER SERINE/THREONINE KINASE 3 317 - -
Lele20g1128 357 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Lele20g1128 357 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1128 357 MobiDBLite consensus disorder prediction 303 357 - -
Lele20g1128 357 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele20g1128 357 Coils Coil 317 351 - -
Lele20g1128 357 SUPERFAMILY Protein kinase-like (PK-like) 2 301 IPR011009 -
Lele20g1128 357 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lele20g1128 357 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Lele20g1128 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lele20g1128 357 MobiDBLite consensus disorder prediction 315 341 - -
Lele20g1128 357 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele20g1128 357 CDD STKc_SnRK2 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1128 Lele-ChrLele20 16643905 16646227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1128 3 282 CBL-interacting serine-threonine protein kinases AT4G24400 41.497 7.72e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lele20g1128 Pkinase 6.8e-70 CL0016