Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g1123 ATGGATAATTGTCATCATCAAGTTACGTTCGTTGGTCAGTATGAGGAAAATGAAAGTAAACTTTTATTGCACATTCCAAAAGATTTGAAAGATGTTGATGAAGAAACTATCAGTACTGAAAGTTTATTCATACCAGTATTTAAGAAAAGAAAGCGACTTAGCCTTAATCAGCTGAGAGAGATAAAGGCAGGGTTAGGTGGGAAGCAGACACAACCTAGCAGCAAGCTTAAGACAAAGAAGCGTGAGAGTAGAGACAGATGGTCATCTGAGAGATATAAGGTTGCTGAGCAAAGCATGTGGGAGGTTTTGAAGGCTAAAGGTGCGACGTTTGCCAACCCAATCTCCCGACCTGCATTACGGACTGCTGCCCGTAAACACATTGGTGATACTGGACTATTGGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGTGGGACTGAGCGTTTTCGGCGGTGGTTTAACACCAAAGGAATCATGGAGTATTGGTTGGAGAGTGCTAACCTAGATAAGGTCCGCCAGGATGCTGGGGTGCAGGACCCATACTGGATTCCGCCATCTACATTTAAAGCAGGCAGTCCCCCTCTTCAGAATTCTGATTATTCTGGTGAACTGAAACTGCTTCAAACAGAAATGGCTAAAATGAAGAAAGACATGCAGGAGCTCATAATAATCAAGAACCAAGAGAAAAATGAAGTTAATATGATGGAGGAGACACACAAGGAATTAGTAAAGTGGAAAGCTATGACTGAGCAACGCCTAACTGGGATTTTGACTTCTTTTAAGGGTGTACAGGGCATGCATGGTGATTTGGTAATTTGGAAAAGTAAAGTTGAGCAACAGCTCGTGGAAATAACAAATAAATTGAGTGATCTGAAAGCATCAAGGGAAGGCACGACCAATCCTCCTTTAGAAAGATGGGAAGATTGGCTTCAAAGCACCAATCTAGAGAATATTCAGGGAGACGATGAGCTTATACCATGGTTTGGGAGTACGGAACTGGTGAATCTTGAGCAAGAAGTTGCCCTCCAAGATCCTAACTCGGCCCTACCCAGTCAGCTGCTAAATGACAATATGACTAACATGAAGAGTGATTTGCTGGAAACGTTGCCCAACAAACAAGAGGAAGATCAACCTAATGTGACTCCGGATTCTTCTATGACTGATAATTCAAAGTCAGACCTTGACAACTCAGTGATGGTGTTTCAGGAGATGCTCACGGACTTGTTTAAATGGAAAGACATGATGGAGAAGCAGATGGCCGAGCTATCAAGTTATGTATATGGAATGCTGGCGACCAAGTAG 1311 0.4287 MDNCHHQVTFVGQYEENESKLLLHIPKDLKDVDEETISTESLFIPVFKKRKRLSLNQLREIKAGLGGKQTQPSSKLKTKKRESRDRWSSERYKVAEQSMWEVLKAKGATFANPISRPALRTAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWFNTKGIMEYWLESANLDKVRQDAGVQDPYWIPPSTFKAGSPPLQNSDYSGELKLLQTEMAKMKKDMQELIIIKNQEKNEVNMMEETHKELVKWKAMTEQRLTGILTSFKGVQGMHGDLVIWKSKVEQQLVEITNKLSDLKASREGTTNPPLERWEDWLQSTNLENIQGDDELIPWFGSTELVNLEQEVALQDPNSALPSQLLNDNMTNMKSDLLETLPNKQEEDQPNVTPDSSMTDNSKSDLDNSVMVFQEMLTDLFKWKDMMEKQMAELSSYVYGMLATK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g1123 436 Coils Coil 200 241 - -
Lele20g1123 436 PANTHER PROTEIN DYAD 5 434 IPR044221 GO:0007131|GO:0051177|GO:0051321
Lele20g1123 436 Coils Coil 277 297 - -
Lele20g1123 436 MobiDBLite consensus disorder prediction 372 396 - -
Lele20g1123 436 MobiDBLite consensus disorder prediction 64 89 - -
Lele20g1123 436 MobiDBLite consensus disorder prediction 75 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g1123 Lele-ChrLele20 16614745 16616685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g1123 86 167 PHD Transcription Factor Family AT5G22260 42.169 3.64e-07 50.4